Thalassolituus oleivorans R6-15: R615_16680
Help
Entry
R615_16680 CDS
T03056
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor03420
Nucleotide excision repair
tor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R615_16680 (uvrD)
03430 Mismatch repair
R615_16680 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tor03400
]
R615_16680 (uvrD)
Enzymes [BR:
tor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R615_16680 (uvrD)
DNA repair and recombination proteins [BR:
tor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R615_16680 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
R615_16680 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
AAA_11
Cas_Cas2CT1978
Motif
Other DBs
NCBI-ProteinID:
AHK17021
LinkDB
All DBs
Position
complement(3589361..3591571)
Genome browser
AA seq
736 aa
AA seq
DB search
MDISLLLDSLNDGQRNAVAASSPHQLVLAGAGSGKTRVLVHRIAWLLQVENVSPFAVMAV
TFTNKAAKEMRGRLEHLLNIPSNGLWVGTFHGLAHRLLKQHWQEAKLPQHFQILDSDDQL
RVIKRLMKAHNIDDTRYPPKQIQWYINGQKDEGRRAAHVMPSGDPFGRQLHDFYYIYEEN
CQQNGLVDFGEILLRAHELWLHNPDLLAHYQQRFRYILVDEFQDTNNIQYAWIRLLAGNK
VSVMAVGDDDQSIYGWRGANVGNIRDFQKDFPGAELIKLEQNYRSTANILAAANAVIANN
QGRLGKELRTDDEDGEKIVLYSAFNEQDEARYIADLVDEWAKAGRARTDMAILYRSNAQS
RTLEEALLRAGIPYRIYGGQRFYERLEIKNALSYLRLMLTRDDDAAMERVINVPARAIGE
KSVDILRSFARDHGCSLWQAAAGAIKHGLLPKRASAAVQSFLDLIDELSVGMNDLPLHEL
MDQIITNSGLIEHHRKEKGEKGQARIDNLEELINAAKQFEPSAAEAEDPQADDLSPIAVF
LDSAALDAGDAQADEYDDAVQLMTLHSAKGLEFPQVVLAGVEEGLFPHKMSMDEADGLEE
ERRLAYVGITRAMEKLIITHAESRRLYGQENFSTPSRFIREIPSDLIQEVRLKNSVSRPL
TARDRNNYGGSSYQSEPAFVQTQYPFSLGQRVYHEMFGEGMVLQFEGQGPGLRVQVNFDD
AGSKWLVASFAKLEAL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcattgcttttagattctttgaacgacggccaacgcaacgctgtggctgcc
agttctccgcaccaattggtgcttgctggtgccggttcgggtaaaactcgagtactggtg
caccgtattgcttggttgttacaggttgagaacgtgtcaccgtttgccgtgatggcggtg
acctttaccaataaagccgctaaagaaatgcgtggccggttggagcacttactcaacatt
ccttcaaatggattgtgggtgggcacatttcatggcttagcgcaccgcttgctaaaacag
cattggcaagaagccaagctgccacagcattttcaaattttggatagcgatgatcagctg
cgtgtgattaagcgcttgatgaaagcacataacattgacgatacacgttatccgccgaaa
caaattcagtggtatatcaacggccaaaaagacgaaggtcgacgcgccgcacatgttatg
ccgtcaggtgatcccttcgggcgacagttgcacgacttttattatatttacgaagaaaat
tgccagcaaaatggtttggtcgatttcggcgaaatattattgcgtgcgcacgaattatgg
ctgcataaccctgacctattggctcactaccaacagcgtttccgctatattttggtagac
gagtttcaagataccaacaatatccaatacgcatggatacgcttattagcaggtaataaa
gtctcggtgatggccgttggtgatgatgatcaatctatctacggttggcgtggtgctaat
gtcggtaatattcgtgatttccaaaaagattttccgggtgcggaattaattaagcttgag
caaaattatcgttctaccgcgaatatcttagcggccgccaatgcggtgattgcgaataac
caaggtcgtcttggtaaagagttgcgtaccgatgatgaagatggcgaaaaaatagttctc
tacagcgccttcaatgaacaagatgaagcgcgttatatcgctgatttagtcgacgaatgg
gctaaagccggtcgtgcgcgtactgacatggcgattttgtatcgctctaatgcgcagtcg
cggacactcgaggaagcgctattgcgtgcgggtattccttaccgtatttatggtggccag
cgtttctatgagcgcctagaaattaagaacgcactatcgtatctgcgtttaatgttaacg
cgcgatgatgatgcggcaatggagcgtgtcattaacgtacctgcgcgtgccatcggcgaa
aagagcgttgatattttacgcagctttgcccgcgatcatggctgctcgttatggcaagct
gcagccggtgcgattaaacatggtttattgcctaagcgtgcgtcggcagcggtgcaaagt
ttcctcgatcttatcgacgaactcagtgtcgggatgaatgacttgcctctgcatgaattg
atggatcaaattattactaatagcggattaattgagcatcatcgcaaagaaaaaggtgaa
aaaggccaagcgcgcattgataaccttgaagagttaattaatgcggctaaacaatttgag
ccatccgctgctgaggctgaagatccgcaagccgatgatctatcccctattgctgtgttt
cttgatagcgcggcactggatgccggtgatgcacaggcggatgagtacgatgatgcggtg
caattgatgacgctgcactcagccaaaggcttggaatttccgcaggtggtgttagccggt
gtggaagaaggtttattcccgcataagatgtcgatggatgaagccgatggccttgaagaa
gagcgccgtcttgcttacgtcggtataacccgcgccatggaaaagctgattattactcat
gctgaaagtcgtcgtttatatggccaagagaacttcagcactccatcacgttttattcgc
gaaataccatcggatttgattcaagaagtgcgcttaaaaaatagcgtaagtcgtccgtta
acggcccgagaccgcaataactatggtggctcaagttatcagagtgagcctgcgttcgtg
cagacgcaatatccatttagtcttggtcagcgcgtctatcatgagatgtttggtgagggc
atggtattgcagtttgaaggacagggtccgggtttgcgtgtgcaagtgaattttgacgac
gctggcagtaaatggctggtggcgagttttgctaaactggaagctttataa
DBGET
integrated database retrieval system
