Thermus oshimai: Theos_0181
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Entry
Theos_0181 CDS
T02346
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tos
Thermus oshimai
Pathway
tos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Theos_0181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tos03019
]
Theos_0181
Messenger RNA biogenesis [BR:
tos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Theos_0181
BRITE hierarchy
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GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFV75263
UniProt:
K7QVI3
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Position
171505..173208
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AA seq
567 aa
AA seq
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MSLLDLVLLLLVLVLSGALFLRRKGEDGEARRLLEAAREEARLALEAARKEARDLLEAAR
AEARTLKEGAEAKARELEADLRRRLEEESKEARRRLEEAEARLRAEREELRGERERLLAL
QAELKGERERLKEEREELRREAERLSKRGEALDARALRLDALEEALAKREEALKEKESLL
LEREKEVERRLFEVAGLTPEEARRVVLEKLDQELEEEKAQRVRAALERARLEAKREAQKI
LAQAMQRQASETAAQLAVSVVPLPSDAMKGRIIGREGRNIRTFEALTGVDLIIDDTPEAV
LLSSFNPIRREIARMALEELLKDGRIHPSRIEEVVEKAKNEMKTFIYERGEEAALEAGVV
GLKPGLIQLLGRLHFRSSYGQNVLKHSVQVAHLTGIMAAELGLDAGLARRAGLLHDIGKS
VDREVEGSHVEIGIALARRFGEPPEVIDAIAHHHDPENAETLYAVLVAAADALSAARPGA
RRESLEEYLQRLEALERIALSFPGVETAFAVQAGREVRVIVKPDRITDAKATLLAREIAS
RIEREMNYPGQVQVTVVRETRAVDFAR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagccttctggacctggtccttttgcttttggtcctggtcctctccggggcccttttc
ctccgccgcaagggggaggatggggaggccaggcgcctcctcgaggccgcccgggaggag
gcccgcctggccctggaggccgcccgcaaggaggccagggaccttctggaagccgcccgg
gccgaggcccggacccttaaggaaggggcggaggccaaggcccgggagctggaggcggac
ctgaggcgccgcctggaggaggagtctaaggaggcgagaaggcgcctggaggaggccgag
gcccggcttagggcggaacgggaggagcttaggggggaaagggagcgcctcctggccctc
caggcggagcttaagggggagcgggagcggcttaaggaggaaagggaggagcttcgccgg
gaagcggagcgcctttccaaacggggcgaggccctagacgcccgggccctccgcctggac
gccttggaggaggccctggccaagcgggaggaggccctcaaggagaaggaatccctcctt
ctggaacgggagaaggaggtggagcggcgcctctttgaggtggcgggcctcacccccgag
gaagcccggcgcgtggttttggagaagctagaccaggagctggaggaggagaaggcccag
agggtgcgggctgccctggagcgggcccgcctcgaggccaagcgggaggcccagaagatc
ctggcccaggccatgcagcgccaggcctcggagaccgcggcccagcttgccgtttccgtg
gtgcccctcccctcggacgccatgaagggccggatcatcgggcgcgaggggcggaacatc
cgcacctttgaggccctcacgggggtggacctcatcatcgacgacaccccggaggcggtg
ctcctctccagcttcaaccccatccgccgggagatcgcccgcatggccctggaggaactc
ttgaaggacggccgcatccacccaagccgcatcgaggaggtggtggagaaggccaagaac
gagatgaagaccttcatctacgaacggggggaggaggccgccctggaggccggggtggtg
gggctaaagcccggcctcatccagctcctaggccgcctccacttccgctccagctacggc
cagaacgtcctcaagcactccgtccaggtggcccacctcacggggatcatggccgcggag
ctgggcctggacgcggggctggccagaagggctgggcttctccacgacatcggcaagagc
gtggaccgggaggtggaggggagccacgtggagatcggcatcgccctggcccggcgcttc
ggggagcctccggaggtcatcgacgccatcgcccaccaccacgaccccgagaacgccgag
accctctacgccgtcttggtggccgcggcggacgccctttccgccgcccgcccgggggcc
aggcgggagtccttggaggagtacctccagcgcctcgaggccctggagcgcatcgccctc
tccttccccggggtggagacggcctttgcggtgcaggcggggcgggaggtccgggtcatc
gtcaagccggacaggatcaccgacgccaaggccaccctcctggcccgggagatcgcgagc
cggattgaacgggagatgaactaccccggccaggtccaggtcacggtggtccgggagacc
cgggcggtggacttcgcccggtag
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