Thermus oshimai: Theos_0186
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Entry
Theos_0186 CDS
T02346
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit/160 kD subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tos
Thermus oshimai
Pathway
tos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Theos_0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tos03021
]
Theos_0186
03400 DNA repair and recombination proteins [BR:
tos03400
]
Theos_0186
Enzymes [BR:
tos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Theos_0186
Transcription machinery [BR:
tos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Theos_0186
DNA repair and recombination proteins [BR:
tos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Theos_0186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RPOC_hybrid
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AFV75268
UniProt:
K7QVI7
LinkDB
All DBs
Position
178854..183428
Genome browser
AA seq
1524 aa
AA seq
DB search
MKKEVRKVRIALASPERIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPTKDYECAC
GKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAAHIWYVKDVPSKIGTLLDLSA
TELEQVLYFSKYIVLDPKGAVLNGVPVAKKQLLTDEEYRELRYGKQETYPIPAGVDALVK
DGEEVVKGQELAPGVVSRMDGVALYRFPRRVRIEYLKKERAGLRVPLAAWVDKEAYRPGE
VLAELAEPYFFRAEEEGVVEVLPLGEEGHLLLLRQEDAVVARYFLPVGAEPLVVQGEVVE
RGQPLAEAKGLLRMPRHVTAKEVEAEEEGETVYLTFFLEWTEPKDYRIEPHMNVIVPEGA
RVMPGERVVAAIDPEEEVIAEAEGIVHLHEPASIVVMKARLYPFEDDVEVTTGDRVAPGD
ILADGGRVKSEIHGRVEVDLVRNVVRVVESYDIDARMGAEAIQVLLKELDLEKLEAELLE
EMKHPSRARRAKARKRLEVVRAFLDSGNRPEWMVLEAVPVLPPDLRPMVQVDGGRFATSD
LNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDALLDNGRRGSPVTNPGSDRP
LRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLK
KMEEKGIASNVKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPV
LVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARVQMLSAHNLLSPASGEPIA
KPSRDIILGLYYITQVRREKKGAGRAFATPEEALEAYERGEVALNAPIQVAGRETSVGRI
KFVFANPDEALLAVAHGLLDLQDVVTVRFMGQRLETSPGRILFARIVAEAVGDEKVAQEL
IQLDVPQEKNSLKDLVYRSFLRLGVEKTARLLDALKYYGFTLSTTSGITIGIDDAVIPEE
KRKYLEEADRKLMQIEQAYEMGFLTDRERYDQVIQLWTETTEKVTQAVFKNFEENYPFNP
LYVMAQSGARGNPQQIRQLCGMRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARK
GGADTALRTADSGYLTRKLVDVAHEIVVREADCGTTNYISVPLFQLDEVTRSRRLRKRSD
IESGLYGRVLAREVQALGRVLEEGRYLSLEDVDLLIRAAEAGEVQEVPVRSPLTCQTRYG
VCQKCYGYDLSMARPVSIGEAVGVVAAESIGEPGTQLTMRTFHTGGVATGTDITQGLPRV
IELFEARRPKAKAVISEIDGVVRIEETEEKLSVFVESEGFSKEYKLPKEARLVVKDGDYV
EAGQPLTRGAVDPHQLLEAKGPEAVERYLVDEIQKVYRAQGVKLHDKHIEIVVRQMLKYV
EVTDPGDSRLLEGQVLERWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAAS
FQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDEKTLKALEEAR
KEAVEARERPARRPARREQPGKGL
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaagttcgcaaggtccgcattgccctggcctcccccgagaggatccgttcc
tggagctacggggaggtggagaagcccgaaaccatcaactaccgcaccctcaagcccgag
cgggacgggctttttgacgagcgcatcttcgggcccaccaaggactacgagtgcgcctgc
ggcaagtacaagcgccagcgctttgagggcaaggtctgcgagcgctgcggggtggaggtg
acgaagagcatcgtccgccgctaccgcatgggccacattgagctcgccacccctgcggcc
cacatctggtacgtgaaggacgtaccctccaagatcggcaccctcctggacctctcggcc
acggagctggagcaggtcctttacttcagcaagtacatcgtcttagaccccaagggggct
gtcctaaacggcgttcctgtggccaagaagcagctcctcaccgacgaggagtaccgggag
ctccgctacggcaagcaggagacctaccccatccccgccggggtggacgccctggtgaag
gacggggaggaggtggtgaagggccaggagctggcccccggggtggtgagccgcatggac
ggggtggccctctaccgcttcccccgccgggtgcgcatcgagtacctgaagaaggagcgg
gcgggcctgcgcgttcccctggccgcctgggtggacaaggaggcctaccgccccggggag
gtgctggcggagcttgccgagccctacttcttccgcgcggaggaggagggggtggtggag
gtcctgcctttgggcgaggaggggcacctcctcctcctgcgccaggaggatgcggtggtg
gcccgctacttcctccccgtgggggccgagcccctggtggtccagggggaggtggtggag
cggggccagcccctggcggaggccaagggcctcctgcgcatgccccgccacgtgaccgct
aaggaggtggaggcggaggaggaaggggaaacggtctacctcaccttcttcctggagtgg
acggagcccaaggactaccgcatagagccccacatgaacgtcatcgtccccgagggggcg
cgggtgatgcccggcgaaagggtggtggcggccattgaccccgaggaggaggtcatcgcc
gaggcggagggcatcgtccacctccacgagcccgccagcatcgtggtgatgaaggcccgc
ctctaccccttcgaggacgacgtggaggtcaccaccggggaccgggtggcccccggggac
atcctggccgacggcgggcgggtgaagagcgagatccacggccgggtggaggtggacctg
gtgcgcaacgtggtgcgggtggtggagtcctacgacatcgacgcccgcatgggggctgag
gccatccaggtccttctgaaggagctggacctggaaaagctggaggcggagctactggag
gagatgaagcacccctcccgcgcccgccgggccaaggccaggaagcgcctcgaggtcgtc
cgggccttcctggactccggcaaccggccggaatggatggtcctcgaggccgtccccgtc
ctgccccccgacctccgccccatggtccaggtggacgggggccggttcgccacctccgac
ctcaacgacctctaccgccgcctcatcaaccgcaacaaccgcctgaagaagctcctggcc
cagggggcgccggagatcatcatccgcaacgagaagcgcatgctccaggaggcggtggac
gccctcctggacaacggccgccggggaagcccggtgacgaaccccggctccgaccggcct
ctgcgtagcctcacggacatcctctccggcaagcagggccgcttccgccagaacctcctg
ggcaagcgggtggactactcgggccgctcggtgatcgtggtggggccccagctcaagctc
caccagtgcggcctgcccaagcgcatggccctggagctcttcaagcccttcctcctcaag
aagatggaggagaaggggatcgcctccaacgtcaaggcggcccgcaggatgctagaacgc
cagcgggacatcaaggacgaggtctgggacgccctggaggaggtcatccacggtaaggtg
gtcctcttaaaccgcgcccccaccctccaccgcctggggatccaggccttccagcccgtg
ctggtggaggggcagtccatccagctccaccccctggtgtgcgaggccttcaacgcggac
tttgacggggaccagatggccgtgcacgtgcccctctcctccttcgcccaggcggaggcc
cgcgtccagatgctctccgcccacaacctcctctccccggcctccggcgagcccatcgcc
aagcccagccgggacatcatcctggggctttactacatcacccaggtgcggcgggagaag
aagggggcgggccgggccttcgccacccccgaggaggccctggaggcctacgagcggggg
gaggtggccctgaacgcccccatccaggtggcgggccgggagaccagcgtgggccggatc
aagttcgtcttcgccaaccccgacgaggccctgttggcggtggcccacggcctgttggac
ctccaggacgtggtcaccgtgcgcttcatgggccagaggctggagacgagcccgggccgg
atcctcttcgcccgcatcgtggccgaggcggtgggggacgagaaggtggcccaggagctc
atccagctggacgtgccccaggagaagaactccctcaaggacctggtctaccgctccttc
ctgcggctaggggtggagaagaccgcccggcttctggacgccctcaagtactacggcttt
accctctccaccaccagcggcatcaccatcggcattgacgacgcggtcatcccggaggag
aaaaggaagtacctggaggaggccgaccgcaagctcatgcagatcgagcaggcctacgag
atgggcttcctcaccgaccgggagcggtacgaccaggtgatccagctctggacggagacc
acggagaaggtcacccaggcggtcttcaagaactttgaggagaactaccccttcaacccc
ctctacgtgatggcccagtccggggcccggggtaacccgcagcagatccgccagctttgc
ggcatgcggggcctcatgcaaaagccctccggggagacctttgaggtgcccgtgcgctcc
tccttccgcgaggggctcaccgtcctcgagtacttcatctccagccatggggcccggaag
ggtggggcggacaccgcccttcgcaccgcggactccggttacctcacccgcaagctggtg
gacgtggcccacgagatcgtggtccgggaggcggactgcggcaccaccaactacatcagc
gtgcccctcttccagctggacgaggtgacccgcagccgccggctgcgcaagcgctcggac
atcgagtccggcctctacggccgggtcctggcccgggaggtgcaggccttaggccgggtg
ctggaggaggggcggtacctctccttggaggacgtggacctcctcatccgggccgcggag
gcgggggaggtgcaggaggtgcccgtgcggagccccctcacctgccagacccgctacggg
gtctgccagaagtgctacggctacgacctctccatggcccgccccgtgtccatcggggag
gcggtgggggtggtggccgcggagtccatcggcgagcccggcacccagctcaccatgcgc
accttccacaccgggggcgtggccacgggcacggacatcacccagggtctgccccgcgtg
atcgagctctttgaggcccgccgccccaaggccaaggcggtgatctccgagatcgacggg
gtggtgcgcattgaggagacggaggagaagctctccgtcttcgtggagtccgagggcttc
agcaaggagtacaagctccccaaggaggcccgcctggtggtgaaggacggggactacgtg
gaggccggccagcccctcacccgcggggccgttgacccccaccagctcttggaggccaag
ggccccgaggcggtggagcgctacctggtggacgagatccagaaggtctaccgcgcccag
ggggtgaagctccacgacaagcacattgagatcgtggtgcggcagatgctcaagtacgtg
gaggtcacggaccccggggacagccgcctcctggaaggccaggtcctggagcgctgggac
gtggaggccttgaacgagcggctcatcgccgagggcaagacccccgtggcctggaagccc
ctcctcatgggggtgaccaagagcgccctctccaccaagagctggctctccgccgccagc
ttccagaacaccacccacgtgctcaccgaggcggccatcgccgggaagaaggacgagctc
atcggccttaaggaaaacgtcatcctgggccgcctgatccccgcgggtacgggctcggac
ttcgtccgcttcacccaggtggtggacgagaagaccttaaaggccctggaggaggcccgc
aaggaggcggtggaggcccgggagcgcccggcccgccgccccgcgcgccgggagcagccg
gggaagggcctctag
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integrated database retrieval system
