Thermus oshimai: Theos_0888
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Entry
Theos_0888 CDS
T02346
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tos
Thermus oshimai
Pathway
tos03030
DNA replication
tos03410
Base excision repair
tos03420
Nucleotide excision repair
tos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Theos_0888
03410 Base excision repair
Theos_0888
03420 Nucleotide excision repair
Theos_0888
03440 Homologous recombination
Theos_0888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tos03032
]
Theos_0888
03400 DNA repair and recombination proteins [BR:
tos03400
]
Theos_0888
Enzymes [BR:
tos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Theos_0888
DNA replication proteins [BR:
tos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Theos_0888
DNA repair and recombination proteins [BR:
tos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Theos_0888
NER (nucleotide excision repair)
GGR (global genome repair) factors
Theos_0888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
HHH_5
TraI_hel_assoc_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFV75944
UniProt:
K7R4S7
LinkDB
All DBs
Position
841723..844215
Genome browser
AA seq
830 aa
AA seq
DB search
MLPLFEPKGRVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALKEDGEVAI
VVFDAKAPSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGLVRLEVPGFEADDVLA
TLAKKAEREGYEVRILSADRDLYQLLSDRIHLLHPEGEVLTPRWLQERYGLSPERWVEYR
ALVGDPSDNLPGVPGIGEKTALKLLKEWDSLEAILKNLDQVKPERVREAIRNNLDKLQMS
LELSRLRTDLPLEVDFAKRREPDWEGLKVFLERLEFGSLLHEFGLLEAPKEAEEAPWPPP
GGAFLGFLLSRPEPMWAELLALAGAKEGRVHRAEDPVGALKDLKEIRGLLAKDLSVLALR
EGLEIPPGDDPMLLAYLLDPGNTNPEGVARRYGGEWKEDAAARALLSERLWQALYPRVAE
EERLLWLYREVERPLAQVLAHMEATGVRLDVPYLEALSQEVAFELERLEAEVHRLAGHPF
NLNSRDQLERVLFDELGLPPIGKTEKTGKRSTSAAVLELLREAHPIVGRILEYRELMKLK
STYIDPLPRLVHPKTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRKAFIAEE
GHLLVALDYSQIELRVLAHLSGDENLIRVFREGKDIHTETAAWMFGVPPEGVDGAMRRAA
KTVNFGVLYGMSAHRLSQELSIPYEEAAAFIERYFQSFPQVRAWIAHTLEEGRKKGYVET
LFGRRRYVPDLNARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLRPLGVRILLQ
VHDELVLEAPKARAEEAAQLAKETMEGAYPLSVPLEVEVGMGEDWLSAKA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctctttgagcccaagggccgggtcctcctggtggacggccaccacctggcc
taccgcacctttttcgccctcaagggcctcaccaccagccggggcgagcccgtgcaggcg
gtctatggcttcgccaaaagcctcctcaaggccctgaaggaggacggggaggtggccatc
gtggtcttcgacgccaaggccccctccttccgccacgaggcctacgaggcctacaaggcg
ggtcgggcccccaccccggaggactttccccggcagctcgccctcatcaaggagctggtg
gaccttttgggcctcgtgcgcctcgaggtcccgggctttgaggcggacgacgtcctcgcc
accctggccaagaaggcggaaagggaggggtacgaggtgcgcattctgagcgcggaccgc
gacctctaccagctcctttccgaccggatccacctcctccaccccgagggggaggtcctg
acccccaggtggctccaggagcgctacggcctctccccggagaggtgggtggagtaccgg
gccctggtgggggacccttcggacaacctccccggggtgcccggcatcggggagaagacc
gccctgaagctcctgaaggagtgggatagcctggaagcgattctaaagaacctggaccag
gtgaagccggaaagggtgcgggaggccatccggaataacctggataagctccaaatgtcc
ctggagctttcccgcctccgcaccgacctccccctggaggtggacttcgccaagaggcgg
gagcccgactgggaggggcttaaggtctttttggagcggcttgagttcggaagcctcctc
cacgagttcggccttctggaggcccccaaggaggcggaggaggccccctggcccccgcct
ggaggggccttcttgggcttcctcctctcccgccccgagcccatgtgggcggagcttttg
gccctggcgggggccaaggaggggcgggtccatcgggcggaagaccccgtgggggcccta
aaggacctgaaggagatccggggcctcctcgccaaggacctctcggtcctggccctgagg
gagggcttagagatcccgccgggggacgaccccatgctcctcgcctacctcctggacccg
gggaacaccaaccctgagggggtggcccggcggtacgggggggagtggaaggaggacgcc
gccgcccgggccctcctttcggaaaggctctggcaggccctttacccccgggtggcggag
gaggaaaggctcctttggctctaccgggaggtggagcggcccctcgcccaggtcctcgcc
cacatggaggccacgggggtgcggctggatgtgccctacctggaggccctttcccaggag
gtggcctttgagctggagcgcctcgaggccgaggtccaccgcctggcgggccaccccttc
aacctgaactcccgggaccagctggagcgggtcctctttgacgagctcggcctacccccc
atcggcaagacggagaagacgggcaagcgctccaccagcgccgccgtcctggagctctta
agggaggcccaccccatcgtggggcggatcctggagtaccgggagctcatgaagctcaag
agcacctacatagaccccctccccaggctggtccaccccaaaaccggccggctccacacc
cgcttcaaccagacggccaccgccacgggccgcctctccagctccgaccccaacctgcag
aacatccccgtgcgcacccccttaggccagcgcatccgcaaggccttcatcgccgaggag
ggccatctcctggtggccctggactatagccagatcgagctccgggtcctcgcccacctc
tcgggggacgagaacctcatccgggtcttccgggaagggaaggacatccacaccgagacc
gccgcctggatgttcggcgtgccccccgaaggggtggacggggccatgcgccgggcggcc
aagacggtgaacttcggggtgctctacgggatgtccgcccaccgcctctcccaggagctc
tccatcccctacgaggaggcggcggccttcatcgagcgctacttccaaagcttcccccag
gtgcgggcctggatcgcccacaccctggaggaggggcggaagaaggggtacgtggagacc
ctcttcggccgccgccgctacgtgcccgacctcaacgcccgggtgaagagcgtgcgggag
gcggcggagcgcatggccttcaacatgcccgtgcagggcaccgccgcggacctgatgaag
ctggccatggtgaagctcttccccaggctcaggcccttgggcgttcgcatcctcctccag
gtgcacgacgagctggtcttggaggccccaaaggcgcgggcggaggaggccgcccagttg
gccaaggagaccatggaaggggcctaccccctctccgtccccctggaggtggaggtgggg
atgggggaggactggctttccgccaaggcctag
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