Thermus oshimai: Theos_1503
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Entry
Theos_1503 CDS
T02346
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tos
Thermus oshimai
Pathway
tos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Theos_1503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tos03019
]
Theos_1503
03016 Transfer RNA biogenesis [BR:
tos03016
]
Theos_1503
Enzymes [BR:
tos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Theos_1503
Messenger RNA biogenesis [BR:
tos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Theos_1503
Transfer RNA biogenesis [BR:
tos03016
]
Prokaryotic type
tRNA degradation factors
Theos_1503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
PCB_OB
S1_RRP5
S1_2
Motif
Other DBs
NCBI-ProteinID:
AFV76531
UniProt:
K7QVG6
LinkDB
All DBs
Position
1447824..1449968
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AA seq
714 aa
AA seq
DB search
MPEATPNTPQAHRFQTEVGGRLLVLETGKYAKQASGSVLVRYADTVVLATAQASEEPIQA
DFLPLTVEFEERHYAVGKIPGSFMRREGRPGEKAILSARMTDRPIRPLFPKGFRHEVQII
VTVLSADQKNPPDILGPIAASAALLLSDIPWQGPIAAVRVGLIGGSFVLNPTLQELEESA
LDLVVAGSREAILMVEAGAGEVDEETMVQALEFAHRAMGPILDLQEAMAKALGKPKMAWT
PPETLGEEEKEVLYRLALERGLSAVLQTASKGERSRALEAFKEALILEALPKGEDGAPLE
EKKPLYESAFEEIVRRELRRLVLEEGRRADGRGPKDLRPIWIEVDVLPRAHGSAIFTRGE
TQVLGTVTLGTGRDEQIIDDLGIDETDPFLVHYNFPPFSTGEVKRLRGVSRREVGHGNLA
KRALRAVLPKEEDFPYTIRVVGDVLESNGSSSMATVCAGCLALMDAGVPIRRPVAGVAMG
LVWEGDRAVILTDILGLEDALGDMDFKVAGTREGITALQMDNKVGGLPREVLKEALLQAR
EARLKILDLMEQVLPAPRPELKPFAPRILSLKVPVDKIGLVIGPGGKNVRALEELGVEVD
IEEDGTVRIYSSDMAAAEKAKAQIEALTREAKVGEIYEGTVTKITPFGAFISLFPGTEGL
LHISQVAPGRVERVEDHLKVGDVIKVKVHRIDEKGKIDLIRPELEGKIPPRRRS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccacacccaataccccccaggcccaccggttccagacggaggtgggcggc
cggctcctggtcctggaaaccggcaagtacgccaagcaggcctcagggtcggttctggtg
cgctacgcggacaccgtggtcctggccacggcccaggcctcggaggagcccatccaggcg
gacttcctccccctcaccgtggagtttgaggagcggcactacgccgtgggcaagatcccc
gggagcttcatgcgccgggagggccgccccggggagaaggccatcctctccgcccggatg
acggaccggcccatccgccccctcttccccaaaggcttccgccacgaggtccagatcatc
gtcaccgtgctctccgcggaccagaagaaccccccggacatcctgggccccatcgcggcc
agcgcggccctcctgctttcggacatcccttggcagggccccatcgccgcggtgcgggtg
gggctcatcggggggagcttcgtcctaaaccccaccctgcaggagctggaggaaagcgcc
ctggacctggtggtggcgggaagccgcgaggccatcctcatggtggaggccggggcggga
gaggtggacgaggagaccatggtccaggccctggagttcgcccaccgggccatggggccc
atcctggacctgcaggaggccatggccaaggccctgggcaagcccaagatggcctggacc
ccccccgagaccctgggggaggaggagaaggaggtcctctaccgcctggccctggagcgg
gggctttccgccgtgctccagaccgcgagcaaaggggagcgcagccgggccctcgaggcc
ttcaaggaggccctcatcctggaggccctccccaagggggaggacggcgcccccttggag
gagaagaaacccctctacgagagcgcctttgaggagatcgtccgcagggagctgaggcgc
ttggtgctggaggagggcaggcgggcggacggccgggggcccaaggacttaaggcccatc
tggatcgaggtggacgtcctgccccgggcccacggctcggccatcttcacccggggagag
acccaggtcctgggcacggtcaccctgggcacgggccgggacgagcagatcatcgacgac
ctgggcattgacgagaccgaccccttcctggtccactacaacttcccccccttctccacc
ggggaggtgaagcgccttcggggggtctcgaggcgggaggtgggccacggcaacctggcc
aagcgggccctacgggccgtcctccccaaggaggaggacttcccctacaccatccgggtg
gtgggggacgtgctggagtccaacggctccagctccatggccacggtctgcgcgggctgc
ctggccctcatggacgccggggtgcccatccgccgccccgtggccggggtggccatgggc
ctcgtatgggaaggggaccgggcggtgatcctcacggacatcctgggcctggaggatgcc
ctgggggacatggacttcaaggtggcgggcacccgggaagggatcaccgccttgcagatg
gacaacaaggtggggggcctgccccgggaggtccttaaggaggccctcctgcaggcccgg
gaggcccggctcaagatcctggacctcatggaacaggtcctccctgccccccgccccgag
ctcaagcccttcgccccccggatcctctccctcaaggtgcccgtggacaagatcggcctg
gtcatcggccccgggggcaagaacgtgcgcgccttggaggagcttggggtggaggtggac
atcgaggaggacgggacggtccgcatctactccagcgacatggccgcggcggagaaggcc
aaggcccagatcgaggccctcacccgggaggccaaggtgggcgagatctacgagggcacc
gtgaccaagatcacccccttcggggccttcatcagcctcttcccgggcacggagggcctc
ctccacatcagccaggtggccccgggccgggtggagcgggtggaggaccacctcaaggtg
ggggacgtgatcaaggtcaaggtgcaccgcattgacgagaagggcaagattgacctgatc
cgccccgagctggaagggaagatcccccccaggcggcgctcctag
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