Thermus oshimai: Theos_1747
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Entry
Theos_1747 CDS
T02346
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tos
Thermus oshimai
Pathway
tos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Theos_1747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tos03019
]
Theos_1747
03009 Ribosome biogenesis [BR:
tos03009
]
Theos_1747
Enzymes [BR:
tos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Theos_1747
Messenger RNA biogenesis [BR:
tos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Theos_1747
Ribosome biogenesis [BR:
tos03009
]
Prokaryotic type
rRNA helicases
Theos_1747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Hera_DD
Hera_RBD
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFV76766
UniProt:
K7QVY3
LinkDB
All DBs
Position
complement(1679106..1680632)
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AA seq
508 aa
AA seq
DB search
MEFANFPLKPEILEALKAKGIFAPTPIQAAALPIALDGRDLIGQARTGTGKTLAFALPIA
ERLAPSSERGRPPRALVLTPTRELALQVAEEVASVAPHLKVVAVYGGTGYGKQKEALARG
ADVVVATPGRALDYLEQGVLDLSRVEIAVLDEADEMLSMGFEEEVERLLSATPKERQTLL
FSATLPSWARKLSERYMRAPVLINVVREEGVTYQEEAILAPTDRLGLLSDLLFVKAPKRA
IVFTSTKRETEEVAAGLLQAGHPARAIHGDLSQSDRERVLKAFREGEVRVLVATDVAARG
LDIPEVDLVVHYRLPQSPEAYQHRSGRTGRAGRGGEVVAFYGPREKRELMALEKAVGRTF
RRVNPPTPEEVLEAKWQHLLARLAGVPERDYKLYLDFAQRLFAEGRVEVVAALMALLLGG
APKEKSLLTGEEGWRTFKATGARLTLPRLVALLKERGLEVGKILEAEDGFYVDLRPQDLP
KLSQVQGLRLEQAKRVEGVLAAPGPKKR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgccaactttcccttgaagccggagatcctggaggccctaaaggccaagggc
atctttgcccccacccccattcaggccgccgcgttgcccatcgccctggacgggcgggac
ctcatcggccaggcccgcacgggcacgggcaagaccctggccttcgccctgcccatcgcc
gagcgcctggccccctcttccgagcggggccgcccccccagggccctggtcctcaccccc
acccgggagctggccctgcaggtggcggaggaggtggcctccgtggccccccacctcaag
gtggtggccgtctacgggggcaccggctacggcaagcaaaaggaggccctggcccggggg
gccgacgtggtggtggccacccccgggcgggccctggactatttggagcagggggtcttg
gacctctcccgggtggagatcgccgtcttggacgaggcggacgaaatgctctccatgggg
tttgaggaggaggtggaaaggcttctttccgccacccccaaggagcgccagaccctcctc
ttctccgccaccctgccctcctgggcccggaagctttccgagcgctacatgcgcgccccc
gtgctcatcaacgtggtgagggaggagggggtgacctaccaggaggaggccatcctggcc
cccaccgaccgactgggcctcctttccgacctcctctttgtgaaggcccccaagcgggcc
atcgtcttcacctccaccaagcgggaaacggaggaggtggccgcgggcctcctccaggcg
ggccaccccgctcgggccatccacggggacctttcccagtcggaccgggagcgggtcctg
aaggccttccgggagggggaggtgcgcgttttggtggccacggacgtggccgcccggggc
ctggacatccccgaggtggacctggtggtccactaccgcctgccccaaagccccgaggcc
taccagcaccgctccggacgcacgggccgggccgggcgggggggcgaggtggtggccttc
tatggccctagggagaagcgggagctcatggccctggaaaaggccgtgggccgcaccttc
cgccgggtgaacccccccacgccggaggaggtcttggaggccaaatggcaacacctcctg
gcccgcctggccggggtgccggagcgggactacaagctctacctggacttcgcccagcgc
cttttcgccgaggggcgggtggaggtggtggcggccctcatggccctcctcctgggcggg
gcccccaaggagaagagcctcctcacgggggaggagggctggcgcacctttaaggccacc
ggggcccggctcaccctgccccgcctggtggccctcctcaaggagcggggcctcgaggtg
gggaagatcctcgaggcggaggacggcttttacgtggacctccgcccccaggatcttccc
aagctcagccaggtccagggccttcgcctggagcaggccaagcgggtggagggggttttg
gcggcccctggcccgaaaaagcgctag
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