Thermus oshimai: Theos_2188
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Entry
Theos_2188 CDS
T02346
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tos
Thermus oshimai
Pathway
tos03030
DNA replication
tos03430
Mismatch repair
tos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Theos_2188
03430 Mismatch repair
Theos_2188
03440 Homologous recombination
Theos_2188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tos03032
]
Theos_2188
03400 DNA repair and recombination proteins [BR:
tos03400
]
Theos_2188
Enzymes [BR:
tos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Theos_2188
DNA replication proteins [BR:
tos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Theos_2188
DNA repair and recombination proteins [BR:
tos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Theos_2188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
AFV77181
UniProt:
K7QWL4
LinkDB
All DBs
Position
complement(2052947..2056612)
Genome browser
AA seq
1221 aa
AA seq
DB search
MGQKLRFAHLHQHTQYSLLDGAAKLSDLLKWVKEVSPEDPALAMTDHGNLFGALEFYKKA
TAMGVKPIIGYEAYVAAESRFDRKRGKGLDGGYFHLTLLAKDFTGYQNLVRLASRAYLEG
FYEKPRIDREILREHSEGLIALSGCLGAEIPQFILQDRLDLAEARLNEYLSIFGDRFFIE
IQDHGLPEQKKVNAVLKEFARKYGLGMVATNDGHYVRKEDARAHEVLLAIQSKATLDDED
RWRFPCDEFYVKTPEEMRAVLPEEEWGDEPFDNTVEIARMCNVDLPIGDKMVYRIPRYPL
PEGRTEAQYLMELTLKGLLKRYPDRITEAFYREVFRRLGQLPPHGEGEALAEALAQVGWG
AWEGLMAGLPPLEGVKEWTAEAILHRALYELSVIEKMGFPGYFLIVQDYINWARENGISV
GPGRGSAAGSLVAYAVGITNIDPLRFGLLFERFLNPERVSMPDIDTDFSDRERDRVIQYV
KARYGEDKVAQIGTLGTLASKAALKDVARVYGIPHKRAEELAKLIPVQFGKPKPLQEAIQ
AVPELRAEMEKDPKVREVLEVAMRLEGLNRHASVHAAGVVIAAEPLTDLVPLMRDTSGQG
VVTQYDMGAVEALGLLKMDFLGLRTLTFLDEAKRIVKESKGVELDYDRLPLDDPKTFALL
ARGETKGVFQLESGGMTATVRGLKPRRLEDIIALVSLYRPGPMEHIPTYIRRHHGQEPVN
YAEFPHAEKYLRPILDETYGIPVYQEQIMQIAAQVAGYSLGEADLLRRAMGKKKVEEMQK
HRARFVQGAAERGVPEEEAHRLFDMLEAFANYGFNKSHAAAYSLLSYQTAYVKAHYPVEF
MAALLSVERHDSDKVAEYIRDARAMGIPVLPPDVNRSGFDFKVVGEEILFGLSAVKNVGE
AAARAILEERERGGPYRSLGDFLKRLPEQVVNKRALESLVKAGALDAFGDRARLLASLEP
LLKWAAEERERVRSGMMGLFLEVEEPPLLPVSPLDEITRLRYEKEALGIYVSGHPVLRYP
GLRETATCTLEELPEFAKGPGRPRLLLAGMVEEVVRKPTRSGGMMVRFTLSDETGAQEVV
SFGRFYEAVSPKLKEDLPVLVLAEVERTEENLRVVALAVWPYEELQEMPKALEVEADHAL
LDDRGIAHLKSLLDEHPGELPLYLRVQGPFGEAVFALRETRVSEAALPLLEAEGFRAYLL
PDREHLLQGPNGGPKEEAVPF
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaaagctccgcttcgcccacctccaccagcacacccagtactccctcctggat
ggggcggccaagctctccgacctcctcaagtgggtgaaggaggtctcccccgaggacccc
gccctggccatgacggaccacggcaacctcttcggggccctggagttttacaagaaggcc
acggccatgggcgtgaagcccatcatcggctacgaggcctacgtggccgcggaaagccgc
tttgaccgtaaaagggggaagggcctggacgggggctacttccacctcaccctgctggcc
aaggacttcacggggtaccaaaacctggtgcgcctggccagccgggcttacctggaaggc
ttttatgaaaaaccccgcatagaccgggagatcctccgcgagcactcggaggggctcatc
gccctctcggggtgcctgggggcggagatcccccagttcatcctccaggaccgcctggac
ctggcggaggcccggctgaacgagtacctttccatctttggcgaccgcttcttcattgag
atccaggaccacggccttcccgagcaaaagaaggtgaacgcggtcctgaaggagttcgcc
cgcaagtacggcctggggatggtggccaccaacgacggccactacgtgcgcaaggaggac
gcccgggcccacgaggtgctcctggccatccagtccaaggccaccctggacgacgaggac
cgctggcgcttcccctgcgacgagttctacgtgaagaccccggaggagatgcgggccgtg
ctccccgaggaggagtggggggacgagcccttcgacaacacggtggagatcgcccgcatg
tgcaacgtggacctccccatcggggacaagatggtctaccgcatcccccgctaccccctt
cccgaggggcgcacggaggcccagtacctgatggagctcaccctaaagggcctcctcaag
cgctaccccgaccgcatcaccgaggccttctaccgggaggtcttccggaggctcggccag
cttcccccccatggggagggggaggccctggcggaggccctagcccaggtggggtggggg
gcgtgggaggggctcatggccgggctcccccccctcgagggcgtgaaggagtggacggcg
gaggccatcctccaccgggccctgtatgagctgtccgtcattgagaagatgggctttccc
ggctacttcctcatcgtgcaggactacatcaactgggcccgggaaaacgggatctccgtg
gggcccggccggggcagcgccgcggggagcctggtggcctacgcggtggggatcaccaac
atagaccccctgcgcttcggcctcctctttgagcgcttcttaaaccccgagcgggtctcc
atgcccgacatcgacacggacttctccgaccgggagcgggaccgggtgatccagtacgtg
aaggcccgctacggggaggacaaggtggcccagatcggcaccctggggaccctggcctcc
aaggcggccctcaaggacgtggcccgggtctacgggatccctcataaaagggcggaggag
ctcgccaagctcatccccgtgcagttcggcaagcccaagcccctgcaggaggccatccag
gcggtgcccgagctcagggcggagatggagaaggaccccaaggtgcgggaggtgctggag
gtggccatgcgcctggagggcctgaaccgccacgcctccgtgcacgccgccggggtggtt
atcgccgcggagcccctcacggacctggtccccctcatgcgggacaccagcggccagggc
gtggtgacccagtacgacatgggggcggtggaggccttgggcctcctgaagatggacttc
ctgggcctaaggaccctcaccttcctggacgaggccaagcgcatcgtgaaggagtccaag
ggggtggagctggactacgaccgcctgcccctggacgaccccaagaccttcgccctcctg
gcccggggggagaccaagggggtgttccagctggagtccggggggatgacggccacggtg
cgggggcttaagccgaggaggttggaggacatcatcgccctggtttccctctaccgcccg
gggcccatggagcacatccccacctacatccgccgccaccacggccaggagccggtgaac
tacgcggagttcccccacgcggagaagtacctgaggcccatcctggacgagacctacggc
atccccgtctaccaggagcagatcatgcagatcgccgcccaggtggcgggctactccctg
ggggaggcggaccttctccggagggccatggggaagaagaaggtggaggagatgcagaag
caccgggcgcgcttcgtccagggggcggcggagcggggggtgcccgaggaggaggcccac
cggctttttgacatgctggaggccttcgccaactatgggtttaacaagagccatgccgcc
gcctactccctcctctcctaccagaccgcctacgtgaaggcccactacccggtggagttc
atggccgccctcctctccgtggagcggcacgactccgacaaggtggcggagtacatccgg
gacgcccgggccatgggcatccccgtcctgccccccgatgtgaaccgctcgggctttgac
ttcaaggtggtgggggaggagatcctcttcgggctttccgcggtgaagaacgtgggggag
gccgcggcccgggccatcctggaggagagggagcggggcgggccctaccggagcctgggg
gacttcttaaagcgcctccccgagcaggtggtgaacaagcgggccctggagtccttggtg
aaggccggggccctggacgccttcggggaccgggcaaggcttctcgcctccctcgagccc
ctcttaaagtgggcggcggaggagcgggagagggttcgctcggggatgatgggcctcttc
ctggaggtggaggagccccccctcctccccgtttcccccctggacgagatcacccgcctg
cgctacgagaaggaggccctagggatctacgtttccggccaccccgtgctccgctacccg
ggccttagggagaccgccacctgcaccctggaggagcttcctgagttcgccaagggtccg
gggcggcccaggctcctccttgcgggcatggtggaggaggtggtgcgcaagcccacccgc
tctggggggatgatggtccgcttcaccctctccgacgagacgggggcccaggaggtggtc
tccttcggccgcttctacgaggccgtctcccccaagctcaaggaggacctccccgtcttg
gtgctggcggaggtggagcgcacggaggagaacctccgggtggtggccctggcggtctgg
ccttacgaggagctccaggagatgcccaaggccttggaggtggaggcggaccacgccctt
ttggacgaccggggcatcgcccacctcaaaagcctcctggacgagcaccccggcgagctt
cccctttaccttagggtccaggggccctttggggaggcggtcttcgccctcagggagacg
cgggtttccgaggcggccctgcccctcctcgaggccgagggcttccgggcctacctcctc
cccgaccgggagcacctcctccaggggccaaacggcggccccaaggaggaggcggtgccc
ttttga
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