Theileria orientalis: TOT_010000115
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Entry
TOT_010000115 CDS
T03460
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tot
Theileria orientalis
Pathway
tot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TOT_010000115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tot03021
]
TOT_010000115
03400 DNA repair and recombination proteins [BR:
tot03400
]
TOT_010000115
Enzymes [BR:
tot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TOT_010000115
Transcription machinery [BR:
tot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TOT_010000115
DNA repair and recombination proteins [BR:
tot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TOT_010000115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-GeneID:
20713078
NCBI-ProteinID:
XP_009688948
UniProt:
J7MBW5
LinkDB
All DBs
Position
1:join(268392..268916,268947..269202,269233..269432,269462..269675,269725..269887,269919..270097,270162..270355,270473..270658,270732..270863)
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AA seq
682 aa
AA seq
DB search
MKYDVIRIVFIIILSADLHSSALYLNHNFSGRLKHNFYSFRYLYITQPNISHWKPSNIRE
KYVNARETAGRASILSALNPKNAELHPESLSGVEPKITPEELEKLKKKGLLDGDVKSWRN
WHIVTRGRTLVFHDSVGEWDDIGTKMLPEADKNLKITEPYALRKPLKYWGFLRGIDDNIM
SYPIMQEYYRDTYGKIDVHEHGGNNPLYNPLLFQPFYGMDKDRKGIGYHAPMLFKGWIGG
DKNTPTKVKEASDIIRIPDSGRLYQKFYMGPYPVTMGWTIGSLLKVMTLSRCPGHAIVAL
KIHNMEKDTTVPGVHDDLLNIALNLKSVSLQTLEPGREARVRTLIKGPAMLCAGALEWPP
FVKVANPETYITKLDEGAELDLEIKIEWGRGFWIADTKGLYRTEEGADSLCHKRRNIKEV
DEEDFYPTSCVFGGCRMIRLSVHKLMGQRWCAMTYTCPDPMDQLVVEIWTDVSTTPKDVL
DFGLTEVIAWITELKRQISHDVDFENEDEQLKDVWEKIDKYGSLKHRQELMGGPPVVPLH
ESGIIPNLKESDCHYLHPGDHKRIPQAPFSLPNDRPDRPSLDTLQWLAEQLQSEEYEDES
EINAKNYEKFVPKPVEDTFENKDIDLLPVNAEMIASLRMSGFNTMSDIMGFTVEELSHYP
GFTVDAARSIKSFLDENRTPNV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgacgtgatacgaattgtatttattattattttatctgctgatttacactcc
tcagcactttatctaaatcataattttagtggaaggctgaaacacaacttttattccttc
cgctatttgtacattacacagccaaatatttcacactggaaaccaagtaatattcgtgaa
aaatatgtaaatgccagagaaacagctggtagagcctcgattctgtctgctctcaacccc
aagaatgctgagttacaccctgaatcccttagtggagtagaacctaagataactcccgaa
gagctggaaaaacttaagaagaaaggtttgctggacggagatgtcaagagttggagaaac
tggcacattgtaaccagaggtagaacgctcgttttccatgattctgtaggagaatgggat
gacattgggactaaaatgcttccagaggctgacaaaaacttgaagattacggaaccgtac
gctctgagaaagccgctcaagtattggggatttttgaggggaatagacgacaacataatg
tcgtatccgatcatgcaggagtactaccgggacacctacgggaaaatagacgtccacgaa
cacggagggaataatcccctctacaacccgttgctgttccagccgttctatgggatggac
aaggaccgcaagggcatcggataccacgcgcccatgctgttcaagggctggattggaggg
gacaagaataccccaaccaaggtcaaggaggcgagcgatatcataaggatacctgacagc
gggaggctgtaccaaaagttttacatgggaccctaccctgtcaccatgggatggaccata
gggtcactgctgaaggtgatgacactgtccaggtgccctggccacgcaatagttgcgctc
aaaatccataatatggaaaaggatacgacggtgccaggcgtccacgacgacctgctgaac
atagccttgaacttgaaatcggtttcgttgcagaccctggaaccaggcagggaagcgcga
gtgaggaccttgattaaggggcctgccatgctgtgcgcaggagctctagaatggcccccg
ttcgtcaaggtggcgaaccctgagacgtatatcacgaagctcgatgagggcgcggagtta
gacctggagataaagattgaatggggacggggcttttggatagctgacaccaaggggctc
taccggactgaggagggcgcggactccctgtgccacaagaggaggaacataaaggaggtg
gacgaggaggacttctatccgaccagctgcgtcttcggaggatgcagaatgatacggctg
tcagtgcataagctgatgggccagaggtggtgtgcaatgacgtatacgtgcccagatccc
atggatcagctggtcgtagagatatggaccgacgtgtcgacgacgcccaaggacgtgctg
gacttcggcctgactgaagtgatcgcctggatcactgagctgaagaggcagatctcccac
gacgtggactttgaaaacgaagatgagcagctgaaggacgtgtgggaaaagattgacaag
tacgggtcactcaaacacaggcaggagcttatgggcggtccaccggtggtgcctctgcac
gaatctggcattattcccaacttaaaggagagcgactgccactatctgcaccctggcgat
cacaaaaggatcccgcaggctcccttttcgctcccaaatgacagaccagatagacccagt
ctggacacgttgcaatggctagccgagcagcttcagagtgaagagtacgaggacgagtcg
gaaataaatgcgaagaactatgaaaaattcgtgcccaaacccgtggaagatacctttgaa
aacaaggacattgaccttctgccagtaaacgcggaaatgattgcatcgcttagaatgagc
ggctttaacaccatgtctgacatcatgggctttaccgtcgaggagctgtctcactaccca
gggtttacggtggatgccgccaggagcattaaaagcttcctcgatgagaacagaacacct
aatgtttaa
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