Theileria orientalis: TOT_010000283
Help
Entry
TOT_010000283 CDS
T03460
Name
(RefSeq) 3'-5' exoribonuclease
KO
K07573
exosome complex component CSL4
Organism
tot
Theileria orientalis
Pathway
tot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOT_010000283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_010000283
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TOT_010000283
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
TOT_010000283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
20713217
NCBI-ProteinID:
XP_009689116
UniProt:
J4D5A6
LinkDB
All DBs
Position
1:join(623224..623361,623418..623575,623710..623794,623915..623996,624026..624092,624280..624301)
Genome browser
AA seq
183 aa
AA seq
DB search
MDDIVFPGTLLGTVHEYTPSNNVYVKDSVIYSAILGNVSYSSEDSTKTSVSVVSNHIKTP
YVGATVIAQIIKLNITKAECNIICVDGRFVKDYFKGVLSSNNVLESKNIEVFMYDWFKPG
DFIKSKVIYAGEGKQFVLSTAGLQLGVIKTTSKNGEPMVPISWKYFMSVDSKSVEKRKVA
KND
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggacgacattgtctttcccggtacccttttgggcaccgttcatgaatacacaccgtcc
aataacgtctacgtcaaggattccgttatatattccgcaattctgggcaatgtttcatat
tcgtcggaagactcaacgaagacttctgtgagtgtcgtttccaaccatattaaaactccg
tacgtcggagccaccgttatcgcacaaatcattaagctgaacataacgaaggccgaatgt
aacattatctgcgtcgatgggcggtttgtcaaggattatttcaaaggagtcctgagcagc
aacaacgttttggaatccaaaaacattgaagttttcatgtatgattggtttaagccaggg
gattttattaaatcgaaagtgatatatgctggagaggggaagcagtttgttttatcaact
gcaggtttgcagctcggcgtcattaaaacaacttctaaaaatggcgagcctatggttcca
atatcctggaagtacttcatgtccgtggattccaagtctgtggagaagagaaaagtggca
aagaacgattaa
DBGET
integrated database retrieval system
