Theileria orientalis: TOT_010000587
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Entry
TOT_010000587 CDS
T03460
Name
(RefSeq) DEAD-box family helicase
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
tot
Theileria orientalis
Pathway
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_010000587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tot03041
]
TOT_010000587
Enzymes [BR:
tot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TOT_010000587
Spliceosome [BR:
tot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
TOT_010000587
Complex C
U4/U6.U5 tri-SnRNP related factors
TOT_010000587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_7
T2SSE
nSTAND3
Motif
Other DBs
NCBI-GeneID:
20713485
NCBI-ProteinID:
XP_009689427
UniProt:
J4C2R0
LinkDB
All DBs
Position
1:complement(join(1419275..1420116,1420430..1420627,1420691..1420908,1421101..1421280,1421499..1422183,1422277..1423096))
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AA seq
980 aa
AA seq
DB search
MEGDSTGYKSPKESSSHKRNKKEPENRNSSSNEENKDKKEDKVEEEYLRELDLAVEASKG
RNLNLKDDPKYLERLRIEARRAYLEQRELDRLQLEKRVLEEKEILFGNKRVSREKGLERD
EFIQRALKLDRDKVKLAEGAIESRPTEAAVISYELPDSYDEDNLKRLEVLKKKQQGKAKD
KVVNEQELWENKLYKYGTSKFGVTQAEEKREGTKLIDVARKEGRVFKDEVLGDLTEFKDL
VSDSVDFVLDSTLPELKLSDVSHITQGYEEEHEGISCLLMVCADDSEDGTSSEDGSDMEN
RKKKTSNNFLRRLRRLERKQHKMMLMERQKLPIYLYRNELLAAIKKYKTVIVVGETGSGK
TTQIPQYLHEVGYSKAGMIGVTQPRRVAAMSVAARVSKELNVKLGSKVGYSIRFEDYTSS
STLIKFMTDGMLLREFMGDPTLSKYCCLMIDEAHERTLHTDVIFGLVKDLVRYRSDFRLI
ISSATLEAEKFALYFDHAPIFKIPGRRYPVQIYYTKTPEANYLDASIITVLQIHLTQPLG
DILVFLPGQQEIEYIQEELTQRLKNRKDIRELIILTIYSSLPSDMQSKIFEPTPAGARKV
VLSTNISETSITLDNIVYVIDSGFCKLNSYSPKTGLDSLVTLPCSKANANQRTGRAGRIR
AGHCFRLYTKFSYDKEMDDNHDPEITRVNLSSVVLLLKSIGIDDLLNFDFMDPPSPETLI
TSLELIYSLGALNDKGDLTKLGKTMSELPLDPMYAKTLLTSIKNNCYDEIIVIISMLSIG
NNVFYVPKDRKIHADNCHKNFYTGNSDHLMLLNVYNQWKESEFSMSWCYENYVQYKSLIQ
SQNIIEQLKQLVTRLNLLPADGASGSEANGVKTNDGGSSSNSAEMNLKELMLKSIVSGFF
VNVAIRSSLKNEKNFRTIKTKQLVEIHPQSSLFNQQAKYVVFNDLVLTTKQFMRQVSEIQ
SKWLMELAPHFYQNIQLPKQ
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagattccacaggttataagagccctaaggagagctctagtcacaaaaggaac
aaaaaagagcctgaaaatcgcaatagtagttcaaatgaggaaaataaagataaaaaagaa
gataaagtagaagaagaatatttaagagaattggacctggcagtggaagcgagtaaagga
agaaatttgaacctgaaagatgacccaaagtacctagagagactgagaatagaagcgaga
agagcgtacttggagcagagagaattggacagactgcagctggagaagagagtgctcgag
gagaaggaaatactgttcggaaacaaaagagtaagcagagaaaagggcttggaaagagac
gagttcatacaaagggcactgaaactggacagagataaagttaagttggcagaaggagca
atagaatcgaggcctacagaagcagcagtgataagttatgagttgccagacagctacgac
gaagataacctgaagaggttggaggtgctcaaaaagaaacagcagggaaaagcaaaagat
aaagtggtcaacgagcaggagttgtgggagaataagctgtataagtacggaacgagtaag
ttcggagtgacgcaagcagaggaaaagagagaaggaacaaagttaatagacgtagcaagg
aaggaagggagagtgttcaaggacgaagtgctgggagacctgacggagtttaaggacctg
gtgtcagattcagtggatttcgtgctcgattcaacgctgccggagttgaagctgtcagac
gtatcgcatatcacacagggctacgaggaggagcatgaagggattagttgtttattgatg
gtatgtgcagatgactcggaggatggaaccagtagcgaagatggctcggacatggaaaac
aggaagaagaaaacgtcgaacaattttctaaggcgcctgaggaggttggagaggaagcag
cacaagatgatgctgatggaaagacaaaagctaccaatatacctgtatagaaacgagctg
ctggcagcgattaagaagtataagacggttatagtggtgggagaaacgggaagcggaaag
acgacgcagatacctcagtacctgcacgaggtgggatactcgaaggcgggaatgatagga
gtgacgcagccgcgcagagtagcagcaatgtcagtggcggcgcgagtgagcaaggagctg
aacgtgaagcttggctcaaaggtgggatactcgatcaggttcgaggactacacaagcagt
tcgacgctgataaagttcatgacagacggaatgctgctgagggagttcatgggagacccg
acgctctccaagtactgctgcctgatgatcgacgaggcgcacgagaggacgctgcacacg
gacgttattttcgggctcgtgaaggacctggtgcgctacaggagcgacttcaggctgata
atatcctcggcgacgctggaggcggagaagttcgcgctctacttcgaccacgcgccgatc
ttcaaaatacctgggaggaggtacccagtgcaaatatactacacgaagacgccagaggca
aactacctggacgcatcaataatcacagtgctgcaaatacacctgacgcagccactaggg
gacatactggtattcctgccagggcaacaggagatagagtacatacaggaagagttgacg
caaagacttaagaacagaaaggacatacgggagttgataatattgacaatatactcatcg
ctgcccagcgatatgcaaagtaaaatatttgagccgacgccagcaggagcaagaaaggtg
gtgctgtcgacgaacatatcggagacctcgataacgctggacaacatagtgtacgttatc
gactcagggttctgtaaactgaattcatactcaccgaagacagggttggatagcctggtg
acactgccgtgttctaaggcaaacgcgaatcagaggacagggcgcgcaggaaggattaga
gcaggacactgcttcagactttacacaaagttctcgtacgacaaggaaatggacgacaac
cacgacccagaaataacgagagtaaacctgtcctcagtagtactcttgcttaaatcaata
ggcatcgatgatctgctcaactttgattttatggatccgccgtcgccggagacgctgata
acgtcactggagttgatatactcactgggagcactgaacgacaagggagatttgacgaag
ctgggaaagacgatgtcggagctgccgctggatccaatgtacgcaaagacgctgctgacg
tcaataaagaataactgctacgatgaaataatagttatcatatcgatgctgtcgatagga
aataacgtgttctacgtgccgaaggacagaaaaatacacgcggataactgccacaaaaat
ttttatacaggcaacagcgatcacctaatgctgctgaacgtgtataaccagtggaaggag
agtgagttttcaatgtcgtggtgttacgaaaactacgtgcagtacaagtcgctgatacag
tcgcagaacataatagagcagctgaagcagctggtaacgagactaaatctactgcctgca
gatggagcgtcaggcagtgaagcgaatggagttaagaccaacgatggtggcagcagcagt
aacagcgctgaaatgaacctgaaggagctgatgctgaagagcatagtcagcggcttcttc
gtcaacgtggcaatcagaagcagcctgaagaacgagaagaacttcagaacgataaagacg
aagcagctcgtggagatacacccacagagtagcctctttaaccagcaggcgaagtacgtg
gtcttcaacgacctggtcctcacgacgaagcagttcatgaggcaggtctcggagatacag
tcgaagtggctaatggagttggcgccgcatttttaccagaacatacagctgccgaagcag
taa
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