Theileria orientalis: TOT_010000718
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Entry
TOT_010000718 CDS
T03460
Name
(RefSeq) eukaryotic translation initiation factor
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tot
Theileria orientalis
Pathway
tot03013
Nucleocytoplasmic transport
tot03015
mRNA surveillance pathway
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_010000718
09122 Translation
03013 Nucleocytoplasmic transport
TOT_010000718
03015 mRNA surveillance pathway
TOT_010000718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_010000718
03041 Spliceosome [BR:
tot03041
]
TOT_010000718
03009 Ribosome biogenesis [BR:
tot03009
]
TOT_010000718
03012 Translation factors [BR:
tot03012
]
TOT_010000718
Enzymes [BR:
tot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOT_010000718
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TOT_010000718
mRNA cycle factors
Stress granule specific factors
TOT_010000718
Spliceosome [BR:
tot03041
]
Complex C
Other components
EJC/TREX
TOT_010000718
Ribosome biogenesis [BR:
tot03009
]
Eukaryotic type
90S particles
Helicases
TOT_010000718
Translation factors [BR:
tot03012
]
Eukaryotic type
Initiation factors
eIF-4
TOT_010000718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
AAA_30
SLFN-g3_helicase
CMS1
UvrD-helicase
Helicase_RecD
PhoH
PrnB
Motif
Other DBs
NCBI-GeneID:
20713601
NCBI-ProteinID:
XP_009689560
UniProt:
J4DNN3
LinkDB
All DBs
Position
1:complement(join(1759969..1760058,1760107..1760274,1760425..1761051,1761132..1761488))
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AA seq
413 aa
AA seq
DB search
MSSDTNGDASYEVSEDYGLVESFEDLGLKEDILKGIFAYGFDKPSAVQQRAIKPILDGRD
VIIQSQSGTGKTCVFCLGALQVVNSNVRETQVLLLSPTRELAEQSQKVCLALGDYCNVEV
HCCIGGKKVSDDIKALESGVQIVSGTPGRVNHMITDRHLNTRNIKQLILDEADEMLNRGF
KEQVYSVYRYLPPTIQVVLVSATLPHEVIEITNKFMNNPFKVLVKRDELTLEGIRQFFIS
VEKEQWKFDTLCDLYESLIITQAVIFCNTKEKVDWLAKKMKDANFEVCKMHGEMSQKERN
DIMQRFRKGESRVLISTDLWGRGLDVQQVSLVVNYDLPNSRESYIHRIGRSGRYGRKGVA
INFVKVRRLLVMIAYLVIDGYFDNDDDIRILRDIEQYYSTQIDEMPMNISELL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgatactaacggcgatgcctcctacgaagtctccgaggattacggattggtg
gaatccttcgaagatttggggttgaaggaggatattcttaaaggaatatttgcgtacggt
ttcgataagccctcagcagtgcaacaaagagctattaaacctatattggacggaagagat
gtgataattcagtcccaaagcggaaccgggaaaacgtgcgtattttgcctaggagcgctc
caagtcgtaaattcaaacgtcagagaaacccaagtgcttttgttgtcgcctacaagagag
ctggccgagcagtcacagaaggtttgcctggctttgggtgattattgcaacgttgaggta
cactgctgcattggcgggaagaaggtaagcgacgacataaaggcgctggaatcgggagtg
caaatagtctcgggaacgccgggaagagtcaaccacatgatcacggaccgacacctgaac
acgaggaacataaaacagctcatcctggacgaggcggacgagatgcttaacagaggcttc
aaggagcaggtgtactcagtgtacaggtacctgccgccgacgatccaagtggtgctggtc
tcagcaacgctgccgcacgaagtgatagagatcacgaacaagttcatgaataacccgttc
aaggtcctggtgaagcgcgacgagctgacgctggagggcataaggcagttcttcatatca
gtggagaaggagcagtggaagttcgacacgctctgcgacctgtacgagtcgctgataata
acgcaggcggtgatattctgcaacaccaaggagaaggtggactggctggcgaagaagatg
aaggacgccaacttcgaagtgtgcaagatgcacggagaaatgtcgcaaaaggagaggaac
gacatcatgcagaggttcagaaagggggagtcgcgagtgctgatatcgactgacctctgg
ggaagaggactggatgtccagcaggtttctctcgttgtaaattatgatttgccgaatagt
cgtgaaagttacattcatagaattggaagatcaggaaggtacggaaggaagggcgtagca
ataaactttgtaaaggtaagaaggttgctagttatgattgcatacctggttattgacggt
tattttgacaatgacgacgatatcaggattttaagagacattgagcagtactactcgact
caaatcgacgagatgccaatgaatatttcagagctgctttaa
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