Theileria orientalis: TOT_010000966
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Entry
TOT_010000966 CDS
T03460
Name
(RefSeq) DEAD-box family helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tot
Theileria orientalis
Pathway
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_010000966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tot03041
]
TOT_010000966
03009 Ribosome biogenesis [BR:
tot03009
]
TOT_010000966
Enzymes [BR:
tot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TOT_010000966
Spliceosome [BR:
tot03041
]
Complex A
U2 snRNP components
U2 related factors
TOT_010000966
Complex B
TOT_010000966
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
TOT_010000966
Ribosome biogenesis [BR:
tot03009
]
Eukaryotic type
90S particles
Helicases
TOT_010000966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
AAA_30
Flavi_DEAD
ResIII
PhoH
TsaE
AAA_7
SRP54
ABC_tran
AAA_25
AAA_23
ATPase
AAA_24
IstB_IS21
NACHT
Motif
Other DBs
NCBI-GeneID:
20713805
NCBI-ProteinID:
XP_009689812
UniProt:
J4C2Y7
LinkDB
All DBs
Position
1:complement(join(2268372..2270512,2270545..2270602))
Genome browser
AA seq
732 aa
AA seq
DB search
MDSPNPKKRKFGFTDRPPTETQDSTTTLSSDKTNENFKKEVLNDESSPDINRWTNAPYSS
RYYRLLEDRKKLPAWTARRNFIKLVKRNQVLVLVGETGSGKTTQMTQFALEAGLSGMRPI
AITQPRRVAAMSVATRVAEEMDVELGVTVGYSIRFEDKYCDKTLLKFMTDGMLLKEITTD
RTLSNYGMVVLDEAHERTIATDVLFGLFKDLIKLRPDLKLVIMSATLEAKKFQEYFGGCD
ILRVPGSMHPVEIFYTVEPERDYFEASVRTVVNIHMAEPEGDILLFLTGEEEIENARKEI
EAMLSRKNCKDPITILPLYSSLPPSQQQRVFQSVEGRKVVIATNIAETSITIDGIVYVID
PGFSKQKIYNPRGRIESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEAAFNKDLVAET
YPEILRSNIASVVLSLKKMGIDDLVHFDFMDPPAPETMMRALEELNYLKALDDEGELTTT
GSLMAEFPLEPQLSKVLVEANEHSAALELLIIVAMLSCGNVFLRPREAAREADLAKSQFS
APEGDHLTLLNAFNSYRSVPQSSARRYCQDNFLNPRSLSSAVNIYDQLHKIMAKHNLLAP
AASSAPAISYNSAPAGLPGSRGAHRDINLERVRRALVTGFFQQVAYRSVRGHYLLVKDNQ
SVALHPSSTLQHSPQWVIYHEFIHTSKNYIRTVSDIKGEWLIEIAPHYFSTEDMPNGEVK
SALVNLYRSRRS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggactctccaaatcctaaaaagaggaaatttggtttcaccgatcgtccaccaacagaa
acccaggattccacaaccaccttgagctcggataaaactaatgagaattttaaaaaggaa
gtgttaaatgatgaatcatcacctgatataaacagatggactaatgctccatattcttcg
cgctattatagacttcttgaggatagaaaaaagctcccggcatggactgccaggcggaat
tttatcaaattggtaaaaaggaaccaggttttggtactagttggggaaacaggtagcgga
aagaccacacagatgacacagttcgctctggaggctggtttatcggggatgcgtccaata
gcaatcacacagccgcgcagagtcgcagccatgtcagttgcaaccagggttgcggaagag
atggacgtggaacttggcgtcacagtgggctactcgatcaggttcgaggataagtactgc
gacaagaccctgctgaagtttatgacagacggcatgctgttgaaggaaatcacgactgac
cgaacgctctctaactacgggatggtggtactggacgaagctcacgagcggacaatagcg
accgacgtgctgttcgggctcttcaaggacctgattaagctgaggccggacctgaagctg
gtgatcatgtcggcaacgctcgaggcgaagaagttccaggagtacttcggaggctgcgac
atcctgagggtgccagggtcgatgcacccggtcgagatcttctacacagtggagccggag
agggactatttcgaggcctcggtcagaacagtggtcaacatccacatggcggagccggag
ggagacattctgctctttctgactggagaggaggagatcgagaacgcacgcaaggagatc
gaggcgatgctgagcaggaagaactgcaaggacccaataacaatactgccgctgtactcg
tcactgccgccgtcgcagcagcagagagtgttccagagcgtggagggcaggaaggtcgtc
atcgcaacgaacatcgcagagacctcgatcacgatcgacggcatcgtctacgtcatcgac
ccgggcttcagtaagcagaagatctacaacccgcgagggagaatcgagtcgctgctggtc
tcgccaatctcgaaggcgtcggcgcagcagagagcaggcagggcagggagaacgaggccc
ggaaagtgtttcaggctctacactgaggcggccttcaacaaggacctcgtggctgagacg
tacccggagatcctgcgctcgaacatagcgagcgtggtgctgagcctgaagaagatgggc
atcgacgacctcgtgcacttcgacttcatggacccgccggcgccggagacgatgatgcgc
gcgctcgaggagctgaactacctgaaggcgctggacgacgagggggagctcacgacgacc
ggcagcctgatggcggagttcccgctggagccgcagctgtcgaaggtgctcgtggaggcc
aacgagcactcggcggccctcgaactcctgatcatcgtcgccatgctctcgtgcggcaac
gtgttcctgaggccgcgcgaggccgccagggaggccgacctggcgaagtcgcagttctcg
gcgcccgagggcgaccacctgacgcttctgaacgctttcaactcctataggagcgtgccg
cagtcctcagccaggaggtactgccaggacaactttttgaacccgaggtcactctcttcg
gccgtgaacatctacgaccagctccacaagataatggccaagcacaacctgcttgccccc
gcggcaagctcagcccctgctatcagttacaattcggctcccgcaggcctacccggtagc
cgtggcgcccacagggacattaacttggaaagggttaggagggccctggtaactggcttc
ttccagcaagtggcctaccggagcgtccgcggccactacctgctggtcaaggacaaccag
agcgttgctctgcacccctcgagcactctccagcactctccgcagtgggtcatttaccac
gagttcatccacacgtccaagaactacattcgcaccgtctccgacatcaagggggagtgg
ctgattgagatcgcacctcactacttcagcaccgaggacatgcccaacggcgaggtcaag
agcgccctggtcaacctatacaggagccggagaagctga
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