Theileria orientalis: TOT_010001224
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Entry
TOT_010001224 CDS
T03460
Name
(RefSeq) DNA-directed RNA polymerase II
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
tot
Theileria orientalis
Pathway
tot03020
RNA polymerase
tot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TOT_010001224
09124 Replication and repair
03420 Nucleotide excision repair
TOT_010001224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tot03021
]
TOT_010001224
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_010001224
03400 DNA repair and recombination proteins [BR:
tot03400
]
TOT_010001224
Transcription machinery [BR:
tot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
TOT_010001224
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TOT_010001224
DNA repair and recombination proteins [BR:
tot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TOT_010001224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
KCTD_C
DUF1890
Motif
Other DBs
NCBI-GeneID:
20714023
NCBI-ProteinID:
XP_009689042
UniProt:
J7MGT5
LinkDB
All DBs
Position
1:complement(join(447990..448283,448351..448599))
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AA seq
180 aa
AA seq
DB search
MYFVVEQWKLINLKPSQLGPNYQQNIEEMLRDQVEGHCTAKYGYVVCVIRIVHNDMGRVQ
DGTAMIVVNVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKAFVSRNSIHPNFVYD
NDGAYPCYTDGTINIRAQSEVRMRLQGIKYDNANMFAIATINADHLGAFESDSQAYNKVV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgttgttgagcaatggaagctaataaacctgaaaccaagtcaacttggccca
aactaccaacaaaacatagaggaaatgttgcgagatcaagttgaaggccactgtactgcg
aaatatggatacgtagtatgcgtaatccgtatagtacacaacgacatgggaagagtgcaa
gacggaacggcaatgatagtagtaaacgtaaaataccaggcaatagtatttaaaccgttt
aaggacgaggttctcgacgcaatagtgacagacgtgaacaagctgggattcttcgctcaa
gcaggaccgctgaaggcttttgtgtcaagaaactcaatacacccaaacttcgtgtacgat
aacgacggagcatatccgtgctacacagacggaacaataaacataagggcacagtctgaa
gtgagaatgagacttcagggtataaagtacgacaacgcaaacatgttcgcaatagcaacg
ataaacgcagaccacctgggagcgttcgaaagcgactcgcaagcatacaacaaagtagta
taa
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