KEGG T03460: TOT

Theileria orientalis: TOT_020000048

Entry

TOT_020000048     CDS       T03460

Name

(RefSeq) uncharacterized protein

K12881

THO complex subunit 4

Organism

tot Theileria orientalis

Pathway

tot03013

Nucleocytoplasmic transport

tot03015

mRNA surveillance pathway

tot03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:tot00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TOT_020000048
  09122 Translation
   03013 Nucleocytoplasmic transport
    TOT_020000048
   03015 mRNA surveillance pathway
    TOT_020000048
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tot03019]
    TOT_020000048
   03041 Spliceosome [BR:tot03041]
    TOT_020000048
Messenger RNA biogenesis [BR:tot03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     TOT_020000048
    TREX complex
     TOT_020000048
Spliceosome [BR:tot03041]
Complex C
  Other components
   EJC/TREX
    TOT_020000048
Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    TOT_020000048

SSDB

Motif

Pfam:

RRM_1 RRM_3 DUF4651

Other DBs

NCBI-GeneID:

20714233

NCBI-ProteinID:

XP_009690078

UniProt:

J4CCQ0

LinkDB

Position

2:complement(join(117169..117381,117411..117479,117532..117761,117794..117845))

AA seq 187 aa
MDVDKAMTTTNKLDMSLDEIGKAMNRRKVNANRRGFKGPGRRQRDFEGRPRRQFGRTNRR
FDDRRVEPRRPRRETKYIVRVSNLDHSVMKEDLMELFSSVGDVAKVWVDYDNTDRSKGTG
GCIYKFTEDAKKAISKFNGSMIEGKAVEMYGEVYSRDRRNFRPRNRYPVRSNRFSRGGPR
RTGRSPW

NT seq 564 nt +upstreamnt +downstreamnt
atggacgtcgacaaagcgatgacaacgaccaacaaactcgatatgtccctggacgagatt
ggtaaggccatgaataggaggaaagtgaacgccaacaggagaggcttcaaagggccggga
cgccgccagagagacttcgagggaaggccgagaaggcagttcggacgcacgaacagaagg
ttcgacgacagaagagtggagccgagaaggccgcgaagagagacgaagtacattgtgaga
gtgtcgaacctggaccacagcgtgatgaaggaggacctgatggagctattcagctcagtg
ggagacgtggcgaaggtgtgggtggactacgacaacaccgacagatcgaaggggaccgga
ggctgcatctacaagttcacggaggacgctaagaaggcaatctccaagttcaacggaagc
atgattgaggggaaggcagtggaaatgtacggagaggtgtacagcagagaccgccgcaac
ttcaggccgagaaatcgctacccagtgagaagcaacaggttctcgcggggagggccgagg
agaaccggcaggtcaccctggtga

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