KEGG   Theileria orientalis: TOT_020000080
Entry
TOT_020000080     CDS       T03460                                 
Name
(RefSeq) replication factor-A protein 1
  KO
K07466  replication factor A1
Organism
tot  Theileria orientalis
Pathway
tot03030  DNA replication
tot03420  Nucleotide excision repair
tot03430  Mismatch repair
tot03440  Homologous recombination
tot03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TOT_020000080
   03420 Nucleotide excision repair
    TOT_020000080
   03430 Mismatch repair
    TOT_020000080
   03440 Homologous recombination
    TOT_020000080
   03460 Fanconi anemia pathway
    TOT_020000080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tot03000]
    TOT_020000080
   03032 DNA replication proteins [BR:tot03032]
    TOT_020000080
   03400 DNA repair and recombination proteins [BR:tot03400]
    TOT_020000080
Transcription factors [BR:tot03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    TOT_020000080
DNA replication proteins [BR:tot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    TOT_020000080
DNA repair and recombination proteins [BR:tot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     TOT_020000080
   MMR (mismatch excision repair)
     TOT_020000080
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     TOT_020000080
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 tRNA_anti-codon OB_MEIOB_N Prok-RING_1 DUF3047 Zn_ribbon_TiaS
Other DBs
NCBI-GeneID: 20714262
NCBI-ProteinID: XP_009690110
UniProt: J4DNZ3
LinkDB
Position
2:complement(join(168638..168730,168752..168898,168932..169048,169071..169143,169176..169262,169294..169369,169402..169522,169552..169664,169857..169998,170028..170273,170304..170372,170403..170475,170506..170703,170735..170766,170798..170894,170929..171066,171178..171335))
AA seq 659 aa
MSLPRILSKDFFTQLAEAVTTANEKYFQEVHECQVPVKLLCLEQSCIADNKYLIETIDGT
VPYAYKHTCLALVPPSPDGDRQLIGKIISFNQYKIARTRSRYLVVLTRISVVPGDYRHLI
GNLIPTLVYHPGLGIEQDESYKSPKKEENTKESGPVRKQENVRSVKTISNPYEPPKNVKK
KLEIPPTKISDLTLYTPKWLIRARVAYKSDIRKFNNQRGESQLFSVDLCDSNGEIRATFF
GESVNKWYTFLEEGQVYSISGGQLKPANKKFNSLRHSCELVLDEHCHIQLFQNDDTIPSF
CFSFTPLDQIQNLKVGEQIDVIGVVVTAKDLQTVQVKSTGKALEKRDFLICDSTKSSIWL
TSWGPKIRNFNYEGPDSHPLVCLKGVKVIEWQGKKLDVMGSTQVIFEPVIQEALELRKWW
NENSHTLNFGTETSRGSSSKVFNQMSSLAEIISATNQALQFKSIDSNGMIFTTRALIEVL
KDGTFSWPSCPGCRKRMNNDDGWYCPRCENRGTPTHMYMLTLKIVDETSHMWVTAMTDVG
EDVQSIMGTKAYNLVKLMENGGTDETGKNFANYFEEVRLTEYVFKIKATVENFMDEPRLK
YVRTNINRNRLSSNYSIAVTLALVETAILKILKAIPLEKEVEFAITDRVERIKKIMTEE
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtcgttgccgcgaatattgtcaaaagatttcttcacacagttggcagaagcagtgact
acggcgaatgagaagtacttccaagaagtccacgaatgccaagtgccagtaaagcttctc
tgcctagaacagtcgtgtatagcagacaacaaatacctaatagaaacaatagatgggaca
gtgccatacgcgtacaaacatacgtgcttggcactagttccaccttcaccggacggagat
cgacaactgatagggaaaataatcagttttaaccaatacaagatagcaagaacgagatcg
agatatttggtagtgttgacgaggatttcggtggttccaggcgactacagacacctaata
ggaaacctgattcctacactggtgtatcacccaggactcggaattgagcaagacgaaagc
tacaaaagcccaaagaaggaagagaacacgaaggagtcaggtccagtgaggaagcaggag
aacgtgagatcagtgaagacgatctcaaacccatacgagccgccgaaaaacgtgaagaaa
aagctcgaaataccgccgactaaaatctcggacctgacgctgtacacaccgaagtggctg
ataagagcaagagtggcgtacaagtcggacataaggaagttcaacaaccagagaggagaa
agtcagctgttctcagtggatctgtgcgactcgaacggagagatcagagcaacgttcttc
ggagagtcggtgaacaagtggtacacgttcctggaggaaggccaggtgtactcgatcagc
ggaggacagctgaagcctgcgaacaagaagttcaatagcctgaggcactcgtgcgagctg
gtgctggacgaacactgccacatacagctcttccagaacgacgacacaataccgtccttc
tgcttctcgttcacgccgctggaccaaatacagaacctgaaggtgggagaacaaatagac
gttattggagtggtggtgacggcaaaagatttgcagacggtgcaagtgaagtccacgggg
aaggcgctggaaaagagagacttcctgatctgcgactctacgaagtcgagcatttggctg
acgagctgggggccgaagataaggaacttcaactacgaaggcccggactcgcacccgctg
gtgtgcctcaaaggagtaaaagtgatagagtggcaaggaaaaaagttggatgtgatggga
tcgacgcaagtaatatttgagccagtgatacaagaagcactggagctgagaaagtggtgg
aacgagaactcgcacaccttgaattttggaacggaaacgagtagaggatcgagttcgaaa
gtgtttaaccaaatgagctcactggcagaaatcatatcagcaacgaatcaagcgctgcag
ttcaagtcaattgactcaaacggaatgatattcacaacgagagcattgatagaagtgcta
aaggacggaacgttctcgtggccatcgtgcccagggtgccgcaagaggatgaacaacgac
gacggatggtactgtccgagatgcgaaaacagaggaaccccaacgcacatgtacatgctg
acgctgaaaatagtggacgagacgtcacacatgtgggtgacagcaatgacggatgtcgga
gaggatgtgcagtcgataatgggaacgaaggcatataacctagtgaagctcatggaaaat
ggaggaacggacgaaacggggaagaattttgcaaactattttgaagaagtgagactaaca
gaatacgtatttaaaatcaaagcaacggtggaaaatttcatggatgaaccaagattaaaa
tatgtaagaaccaatataaacaggaatagattaagcagtaactatagtatagcagtaaca
ttggcattggtagaaacagctatactgaaaatactaaaggcaataccactggaaaaagaa
gtggagttcgcaatcacagatagagtggagagaatcaaaaaaattatgacggaagagtag

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