Theileria orientalis: TOT_020000708
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Entry
TOT_020000708 CDS
T03460
Name
(RefSeq) uncharacterized protein
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
tot
Theileria orientalis
Pathway
tot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOT_020000708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_020000708
Enzymes [BR:
tot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
TOT_020000708
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
TOT_020000708
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
Motif
Other DBs
NCBI-GeneID:
20714835
NCBI-ProteinID:
XP_009690753
UniProt:
J4CD35
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All DBs
Position
2:complement(join(1487047..1487437,1487564..1489050))
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AA seq
625 aa
AA seq
DB search
MAYFMLKLRFHNYLNKFSNNIHKNGFSTLIFTRVLSQNTIGSSYDEYSHIKLRNKIPSFR
KTNRSVIGYSAFQSHNFTTNVTSKLNWDNHCQLIVELIKESDFVALDVEYTGLHIKDERF
IGVEKCYESHVSGAKKFIPCQIGLTMARFEGGTWKVTPTSIFTIPSDGNTFSVNMSTLNF
LKDNNFDFNSWIRHGICHLKPKEEEERKSLILSKLAHIDELTRGINKEDEEFKVNEYDLT
NIQDLEDRKTVEEVVKRVEGWLFSQDKKPLEFEVESAFLRLLIHSVISIKFPNIYSNSCK
KDDRKLVRVYKSQRELLESDRATLLSELSEIEREVGLRTLFDTISSHKKILVGHNCFYDI
LHVYQTFYGDLPDTVESFKAEWLKVFPKVFDTKYISEFFHILNPQSSLKMLYESVLSSST
SRVEVEALPGTKWDITLPGSRRGVIDDIGDRGATEGVVKKFDEHDAGYDSFMTGLVFIHQ
LEEVIKSKNATLSNLVSTTSSSSSKTRTVPKVIDRVFSEVGNSVRLVKCQPAVLNMETQE
DMSRHFYMFGFPNSWKKWEIMKIWSPLWVSVSWIDESSCWVVARNQEDVKNINLIYKMMK
NPQFKLYNYGQYVERVRNNTPAVES
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcttatttcatgttaaaactgagattccataactatttaaataaatttagcaacaat
atacataagaatggcttctctacacttatttttacaagagtattatcgcaaaatacaatt
ggctctagctatgatgagtattcacacattaaattgagaaacaagataccaagttttagg
aaaacgaataggtcagtcatcggctacagcgcatttcaatcgcacaattttaccacaaat
gtgacttcaaaattaaactgggataaccactgccaattaattgtggagttgataaaggaa
tcggattttgtggccctagatgtggagtacacaggcttacacataaaggatgaacggttc
attggagtagaaaaatgttatgaatcgcacgtatcaggagcaaaaaagtttattccctgt
caaattgggttgacaatggcaagatttgaaggaggaacgtggaaagtaacacccacctcg
atctttaccataccctcagatggtaatacattctcagtaaatatgtccacgttgaacttt
ctgaaggataacaatttcgactttaatagctggatcaggcacggaatatgccacctgaag
ccgaaggaggaggaggaaaggaagagtttaatcttatcaaaactggcacacatagatgag
ttgacgagaggaataaacaaggaagatgaggaatttaaagtgaacgagtatgatttgacg
aacatacaagacttggaggacagaaagaccgttgaggaagtggtgaagagagtggagggt
tggctattttcacaggacaagaagccgctggaatttgaagtggaaagcgcgtttctgaga
ctactgatccactcagtgatatcgattaagttcccaaacatctacagcaattcatgcaag
aaggatgataggaagctggtgagggtgtataaatcgcaacgggagctgttggagagtgac
agagcaacactgttgtcggaactgagcgaaatagaaagagaggtgggactgcgcacgcta
ttcgacacaataagtagccacaagaagatactggtgggccacaactgcttctacgacata
ctgcacgtgtaccagacgttctacggggacctgccggacacagtggaaagcttcaaggcg
gagtggctgaaggtgtttccgaaagtgtttgacacgaagtacatctcggagttcttccac
atcctgaacccgcagagctccctgaaaatgctgtacgagtcagtgctgagcagctccacc
agcagagttgaagtggaagccctaccaggcacgaagtgggacataacgctgccagggtca
aggagaggcgtcatcgatgacatcggcgacaggggcgccacagagggcgttgtgaaaaaa
ttcgatgaacacgatgctggatacgacagcttcatgacagggctagtgtttatacaccag
ctcgaggaggtgatcaagtcgaaaaatgcaacactgtcaaacttggttagcactactagt
agtagcagcagtaagacgaggacggttcccaaggtgattgatagggtgttcagcgaagtt
gggaactcagtgcggctagtaaagtgccagccggcagtgctgaacatggagacgcaggag
gatatgtcgaggcacttctacatgttcggcttccctaactcgtggaaaaagtgggaaatc
atgaaaatatggtcgccgctgtgggtgtcagtgtcgtggatcgacgaaagctcgtgctgg
gtcgtggccaggaaccaggaggacgtcaaaaacatcaatttaatatacaagatgatgaag
aatccgcagtttaagctgtacaactacgggcagtacgttgaaagagtgaggaataacacg
ccggcggtggaatcatga
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