Theileria orientalis: TOT_030000054
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Entry
TOT_030000054 CDS
T03460
Name
(RefSeq) DEAD-box RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tot
Theileria orientalis
Pathway
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_030000054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tot03041
]
TOT_030000054
03009 Ribosome biogenesis [BR:
tot03009
]
TOT_030000054
Enzymes [BR:
tot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOT_030000054
Spliceosome [BR:
tot03041
]
Complex A
U1 snRNP components
U1 related factors
TOT_030000054
Complex B
TOT_030000054
Ribosome biogenesis [BR:
tot03009
]
Eukaryotic type
Pre-60S particles
Helicases
TOT_030000054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
20715260
NCBI-ProteinID:
XP_009691093
UniProt:
J4CDA3
LinkDB
All DBs
Position
3:join(122604..123018,123052..123369,123429..124314,124494..124662)
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AA seq
595 aa
AA seq
DB search
MSMNSVSRICRTTNVWRNWTLSRHLSFIYSNFGSKLDRLNAEKVTSLNSYPSYDPSVNTV
STYPVGYNAVEQQVQPFGQVPNYNVVPNQYGFQPSIPFTFNSYGSVPYSRPNYFNNYSRP
YKFNRRPGFRRYSMSSKMHTQQIFSAQKSFDIPVSSVDWNKEELVEIKKDFYDLSYEADS
RPGEEIERILSSHNITIEGEHPLPKPVNTFDEAVFNEPIQKIIKDSKFVEPTPIQKVGWT
SCLTGRDVVGVSQTGSGKTLTFLLPGMLHLMAQPPVGKGGPIMLILAPTRELCLQISDEA
TPYSKMLDLRLVSVYGGASKYVQMKQFENGAEIMVATPGRLLEFLSTGSLKLNRVSYFVM
DEADRMLDMGFEPQIRKIIGQIRPDRQTLMFSATWPKEIRRLASEFCKPDFIYIQVGDLE
LTANENITQKVQVMNSFEIKDSLFNFLDSLPPSKKVLIFSDLKSFSDQLASNLRYRKFRA
ASLHGDKSQAQRERILRMFRTGECNILVATDVAARGLDIKDIDYVVNLDAPKTLLDYIHR
IGRTARGGSKGNSLLFFARDTLNPSKVKFAQDLSNLLSKVNQEVPPELTSIANSL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaattctgtgagtaggatttgtagaacaacaaatgtgtggagaaactggacg
ctgtcccggcacctctcctttatttattctaacttcgggtccaaactcgatcgtttaaat
gcagaaaaggtcacttccttgaattcgtatcccagttatgatccttcagtcaatacggtg
tcaacctatccagttggatacaacgccgttgagcagcaggtccagccctttggacaggta
cccaactacaacgtagttccgaaccaatacggatttcaaccttcaataccattcaccttc
aattcatacggctcggttccatactcacgtccaaattactttaataattatagcaggcct
tacaagtttaacaggaggcctggttttaggagatactcaatgtcaagtaagatgcatact
caacaaatattttcagcgcaaaaaagcttcgacattccagtgtcttcagtcgactggaat
aaggaggagcttgtggagattaaaaaggacttttacgacctgagctacgaggccgacagc
aggcccggagaggagattgagcggatactctcgtctcacaacataacgatagagggggag
cacccgctgccgaagccggtcaacacgtttgacgaggcagtgtttaacgagcccatacag
aaaatcatcaaggactctaagttcgtagagcccacgcctatccaaaaggtgggctggact
tcctgcctaacagggagggacgtcgttggtgtgtcgcaaactgggtctggaaagacgctg
accttccttcttcctggaatgttgcacctgatggcgcagccgcctgtgggcaagggaggt
cccatcatgctcattttggctccgaccagggagctctgcctccaaatatcggacgaggcc
acgccctactcgaaaatgttagacttgaggctcgtctccgtctacggaggcgcctccaag
tacgtgcagatgaagcagttcgagaacggcgccgagatcatggtcgccacgcccgggagg
ctcctcgagttcctgagcaccggcagcctcaagttgaaccgcgtcagctacttcgtgatg
gacgaggccgaccgcatgctcgacatgggctttgagcctcagatccggaagatcatcggc
cagataaggcccgaccgccagacgctcatgttcagcgccacgtggcccaaggagatccgc
aggctcgcctccgagttctgcaagcctgacttcatttacattcaggtcggcgaccttgag
ttgactgcgaacgagaacataactcagaaggtccaggtcatgaactcctttgaaatcaag
gacagcttgttcaactttttggactctctccctccctccaagaaggttctcattttctcc
gacctcaagtccttttccgaccagcttgccagcaatttacgttatcgcaagttccgggct
gcttctctgcacggcgacaagtcgcaggctcagcgggagcgcatcctccgcatgttcagg
actggcgagtgcaacattctcgtggccactgacgtggctgctcgcggcctcgacatcaag
gacattgactacgttgtcaacttggacgctccaaagacccttttggactacattcacaga
attggacgcactgctcgtggcggcagcaagggcaactccttacttttcttcgccagggac
actcttaaccctagcaaggtcaagttcgctcaggacctgtccaacttgctttccaaggtt
aaccaggaggttcctcctgagctcacaagcattgccaactccctgtga
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