Theileria orientalis: TOT_030000434
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Entry
TOT_030000434 CDS
T03460
Name
(RefSeq) U6 snRNA-associated sm-like protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
tot
Theileria orientalis
Pathway
tot03018
RNA degradation
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_030000434
09123 Folding, sorting and degradation
03018 RNA degradation
TOT_030000434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_030000434
03041 Spliceosome [BR:
tot03041
]
TOT_030000434
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TOT_030000434
mRNA degradation factors
5'-3' decay
Lsm complex
TOT_030000434
Spliceosome [BR:
tot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
TOT_030000434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
20715613
NCBI-ProteinID:
XP_009691472
UniProt:
J4C3X0
LinkDB
All DBs
Position
3:complement(join(928581..928665,928697..928865,928969..928999))
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AA seq
94 aa
AA seq
DB search
MAPILEQYIESNVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPEAPVEELELGVY
ILRGDNVVLVGEVDLDIDRSMAGIEAIPLKPVVY
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggcccctattttggagcagtacatcgaaagtaacgtgtttgttatatcagtggacgga
cgagtttttgttggagtgttgaagggattcgaccagctcaccaaccttgttctatataac
tgcttggaacgagtatatcaccccgaggcgccagtagaggagctagaactgggagtgtat
atattaagaggcgataacgtagtactcgtcggagaggttgatttggatatcgacaggagt
atggccggcatagaggccataccgcttaagccagtagtgtactga
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