Theileria orientalis: TOT_030000579
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Entry
TOT_030000579 CDS
T03460
Name
(RefSeq) pre-mRNA processing factor
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tot
Theileria orientalis
Pathway
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_030000579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tot03041
]
TOT_030000579
Spliceosome [BR:
tot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
TOT_030000579
Complex C
U4/U6.U5 tri-SnRNP related factors
TOT_030000579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
20715746
NCBI-ProteinID:
XP_009691617
UniProt:
J4C3Z9
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All DBs
Position
3:join(1240990..1241309,1241358..1241449,1241479..1241648)
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AA seq
193 aa
AA seq
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MANRTDPTAHLIHGTNPQFLFSKILRDKVYNSFYWKESCFGLTAESLIDKAVQLKYVGGT
FGGNRQPSPFLCLVLKMLQIQPDMEIVHEYIKNEDFKYLRALGVYYMRLVGGAAEVYGTL
EPILGDYRKLRFRNTDGSYSIKYMDEFVDECLTSSTYLDVDFPPLAKRMSLEATRALAPR
RSPLQMVKTKSEL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaacagatccaacagcacatctgatacatggaacgaacccacagttcctg
tttagtaagattctgagagataaggtgtacaactccttctactggaaagaaagctgcttc
ggactgacagcagaatctcttatagataaggcagtgcagctgaagtacgtgggaggcacc
ttcggaggaaacagacagccctcgccgttcctgtgcctggtgcttaagatgctgcaaata
cagccggacatggaaatcgtgcacgagtacataaaaaacgaggacttcaagtacctgagg
gcgctaggagtgtactacatgaggctcgtgggcggcgccgcggaggtgtacggcacgctg
gagcccatactgggcgactatcgcaagctgaggttcaggaacaccgacggaagctactca
ataaagtacatggacgagttcgtcgacgagtgtctgacgagctcgacgtacctggacgtc
gactttccgccgctggcgaagaggatgagcctggaggcgacgagggcgctcgcgccccga
aggtcgcctctgcaaatggtgaagacgaagtccgagttatga
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