Theileria orientalis: TOT_030000922
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Entry
TOT_030000922 CDS
T03460
Name
(RefSeq) DEAD-box family helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tot
Theileria orientalis
Pathway
tot03013
Nucleocytoplasmic transport
tot03015
mRNA surveillance pathway
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_030000922
09122 Translation
03013 Nucleocytoplasmic transport
TOT_030000922
03015 mRNA surveillance pathway
TOT_030000922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_030000922
03041 Spliceosome [BR:
tot03041
]
TOT_030000922
Enzymes [BR:
tot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOT_030000922
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TOT_030000922
Spliceosome [BR:
tot03041
]
Complex C
Other components
EJC/TREX
TOT_030000922
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TOT_030000922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
20716059
NCBI-ProteinID:
XP_009691516
UniProt:
J4D965
LinkDB
All DBs
Position
3:complement(join(1029373..1029695,1030027..1031065))
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AA seq
453 aa
AA seq
DB search
MPKAKNVATEDLVDYEEEEGESKVATKDVIKSAGGKKSKADGTMGRGSYVAIHASGFRDF
FLKPEILRAISDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLDVD
ADEPVKRDAQDNLRPISRVSCVGISHTRELAFQIKNEFDRFSKYLPSVRCEVVYGGVPIQ
KDVAMLKDPEKMPHILVGTPGRLLALVKGKHLNMDSVRHFVLDECDKCLEKLDMRQDVQS
IFMATPKKKQVMFFSATMTPEVRELCKRFMQSPVEVFVDDESKLTLHGLLQYYVKLSESV
KNRKLNDLLDTLEFNQVIIFVKSVSRAVTLNNLLTECNFPSIAIHAGLDQSERISRYTQF
KNFDKRILVATDLFGRGIDVERVNIVINYDMPDSTDSYLHRVGRAGRFGTKGLAITFVSS
PEDSSALADVQKRFEVTIPEIPETIDTSLYLNQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagccaagaacgtagctacggaggacttggtcgattatgaagaggaggaaggc
gaatccaaggttgcaaccaaggacgttataaagtcggcgggagggaagaagtcgaaggcg
gacggtacgatgggacgcggcagctacgtcgcaatccacgccagcgggttccgcgacttt
ttccttaagcccgagatcctcagggcgatctcggacgcaggcttcgagcacccgtcggag
gtgcagcacgagactatcccgcacgcgatcacgggagtcgacatcctctgccaggccaag
agcggcatgggaaagacggcagtcttcgtgctgagcatcctgcaacagctcgacgtggac
gcggacgagcccgtcaaaagggacgcccaggacaacctgaggccgatcagcagagttagc
tgcgtgggcatcagccacaccagagaactcgcattccaaattaagaacgagtttgaccgc
ttcagcaagtacctgccctcggtgcgctgcgaggtcgtgtacggcggcgtgccgatccag
aaggacgtggcaatgctgaaggacccggagaagatgccgcacatcctcgtgggcacgccc
gggagactcctggcgctcgtcaagggcaagcacctgaacatggactcggtcaggcacttt
gtgctcgacgagtgcgacaagtgcctggagaagctggacatgcgccaggacgtgcagagc
atcttcatggcgacgccgaagaagaagcaggtcatgttcttcagcgccactatgacgccc
gaggtgcgcgagctctgcaagcgctttatgcagtcgcccgtcgaggtcttcgtcgacgat
gagtcgaagctgacgctccacggcctgctccagtactacgtcaagttgtccgagagcgtc
aagaacaggaagctgaacgacctcctcgacaccctcgagttcaaccaggtgatcatcttc
gtcaagtccgtctcgagggcagtgacgttgaacaaccttctgactgagtgcaacttcccc
tcaatcgccatccatgcaggactggaccagagtgagaggattagcaggtacacgcagttc
aagaacttcgacaagaggattctggtggccaccgacctcttcgggcgcggcatcgacgtc
gaacgcgtgaacatcgtgatcaactacgatatgccggactcgaccgactcgtacctgcac
agagtaggcagagcaggcaggttcggaacaaagggactcgcaatcaccttcgtctcctcg
ccagaggactcttcggctctcgcagacgtgcagaagaggttcgaagtcacaattccggag
atacctgagactattgacacgtcactttacctcaaccagtaa
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