Theileria orientalis: TOT_040000468
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Entry
TOT_040000468 CDS
T03460
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tot
Theileria orientalis
Pathway
tot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TOT_040000468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tot03021
]
TOT_040000468
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_040000468
Transcription machinery [BR:
tot03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TOT_040000468
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TOT_040000468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_9
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
20716529
NCBI-ProteinID:
XP_009692393
UniProt:
J4CE13
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All DBs
Position
4:1024356..1025114
Genome browser
AA seq
252 aa
AA seq
DB search
MYNRRTPNTLESRDVSNYQKRKTRSSEGYARHKQRYDQILERRKQIEAVRSERDRYAHTE
TRYNRNQYKDKSMIICRYFYRYGKCTKGDACLFSHDCTPLNSKDLKLCHYFVKSEGCKKS
AEECKYSHEIHKFLCRQNVIAGFCNQGGKCQFNHLPIESIRRMDDTEKLKFCYNNKKFLV
KSLINYLINDKWIKPQEIGVCDDIKGVTAIVTAYNKIPDHVVKTIPWYLHYTLLILEKDM
NTMQQQKQESNE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtataataggagaactccaaacacattagagtccagagatgtgagtaactatcagaaa
agaaagacaaggtccagcgaagggtatgcacgccataagcagaggtacgaccagatcctt
gagaggaggaagcagattgaggctgtaaggtcggagagagacaggtacgcgcacacggaa
acgcggtacaaccgaaaccagtacaaagataagtcgatgatcatatgcaggtacttctac
aggtacggcaagtgcacaaagggcgacgcctgcctgttctcacacgactgcacgcccctt
aactcaaaggacctgaagctgtgtcactacttcgtcaagtctgagggctgcaagaagagc
gccgaggagtgcaagtactcgcacgagatacacaagttcctgtgcaggcagaacgtaata
gcaggattctgcaaccagggcggcaagtgccagttcaaccacctgcccatcgagtcgatc
cgaagaatggacgacaccgaaaagctcaagttctgctacaacaacaagaagttcctcgtc
aagtcgctgatcaactacctgatcaacgacaagtggattaagcctcaggagattggcgtc
tgtgacgacatcaagggcgtgacggcgattgttaccgcctataacaagatccccgatcat
gtggttaagacgattccgtggtacctgcactatacactgctaattttggaaaaggacatg
aacacaatgcagcaacagaagcaagagtcaaacgagtaa
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