Theileria orientalis: TOT_040000532
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Entry
TOT_040000532 CDS
T03460
Name
(RefSeq) DNA-directed RNA polymerase
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tot
Theileria orientalis
Pathway
tot03020
RNA polymerase
tot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TOT_040000532
09124 Replication and repair
03420 Nucleotide excision repair
TOT_040000532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tot03021
]
TOT_040000532
03400 DNA repair and recombination proteins [BR:
tot03400
]
TOT_040000532
Enzymes [BR:
tot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TOT_040000532
Transcription machinery [BR:
tot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
TOT_040000532
DNA repair and recombination proteins [BR:
tot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TOT_040000532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Dr_adhesin
DUF5817
Motif
Other DBs
NCBI-GeneID:
20716588
NCBI-ProteinID:
XP_009692463
UniProt:
J4CE27
LinkDB
All DBs
Position
4:complement(join(1176470..1177375,1177421..1177494,1177563..1177709,1177977..1178468,1178706..1179089,1179121..1179237,1179365..1179586,1179626..1179793,1179856..1180059,1180127..1180674,1180707..1180818,1180915..1181049,1181085..1181145))
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AA seq
1189 aa
AA seq
DB search
MDIDYMMNSTQHAGGLDRLAESQYTGSTYPDFTSSGYDVNVRLEPTKYFKGEHEGFSEED
TWKVIGSFFNEHGLVHQQIESFNDFITYRMQEIIDSHPAIEITPQPNYRPEEEEENSVLY
RLKFGQLSLNKPSVEEKDGVFKHIWPQEARLRNLTYASQVYIDIEQQTFLNEEGNLVQTD
STVYPRVPLCRIPMMLKSAYCWTKGLTEHDLSDIGECVFDQGGYFVVNGGERVLIAQERM
ANNFVYVFNKKNQKYSAVAQLRSQPDFSQGVTSFSIMILNSQLAKNKMLAALPYVKGDVP
VPILFRALGCISDRDILQRIVYDFSDTQMLSLMRSTLEECSEYTSQEQCLDYIGKRGPTV
GAPLEARIQYAKDLLRRHFLPHVGTEVGSESKKCFYVGYMIHRLLLNQLGRINEDDREHF
GKKRLDLAGALMASSFGALFRKLAKDVKKLLQNQIDSGRSFDVAGAIKSCSQITQGLQYQ
LLTGNWGRDKEGNVVRTGVSQVLNRLTFASYLSHLRRLNTPLGREGKMAKPRQLHNTHWG
MICPAETPEGQAVGLVKNLALMCYISVGSMTSTILDFLLEFGMDSLDEISPVLIKDRVKI
FLNGTWIGVFNQPDALVNLLLELRRKGNISSETSIVRDILSNEIKIFTDSGRSMRPLYIV
ENNRLLITKRHALMIENNQLNWSGLLESGVVEYIDCEEEEICMIAMFPDDLINNNNYCNS
YTHCEIHPSMILGVCASIIPFPDQNQSPRNTYQSAMGKQAMGVYSTNYNLRMDTLSHVLY
YPQKPLVCTRSMEFLRFRELPAGINSIVAIMCYTGYNQEDSLIMNQSSIDRGLFRSVFNR
TYSSEEKYLGSTVIESFTKPTATSNFLNLKRGDYSKLDNDGLIEPGSRSDPNNPNYPAEM
NLRMDCSCCLRPNENGVVDNVLLTVNNKGCKFTKVKVRSVRVPQIGDKFASRHGQKGTIG
MTFRMEDLPFTCEGIVPDIIMNPHAVPSRMTIGHLIECLLGKVGALVGMEGDATPFSKMT
LEQISSRLFKCHYSKYGNEAFHNGFTGNLMASKIFVGPTYYQRLKHMVEDKIHARARGPV
TMLTRQPTEGRSRDGGLRFGEMERDCMISHGAAKMLKERLFDQSDAYRVHVCNLCGLLSI
ANLNNSSFQCTACDNKTQISQVTIPYACKLLLQELMAMAIYPKLVLTEA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggatattgactatatgatgaattccactcaacacgccggtggattggacaggttagca
gaatctcaatacactggctcgacttacccggactttacgtcctcagggtacgatgtaaac
gtcaggttggaacccaccaagtattttaagggtgagcacgagggatttagcgaggaggat
acctggaaggtcataggttcattttttaacgaacacggattagtgcatcaacaaatagaa
agttttaacgattttataacgtatcgtatgcaagagattatagattcacacccagcgata
gaaataactccacaaccaaattaccgcccggaagaggaggaggaaaacagtgtactatat
agattaaagttcggccagctctcgctgaataagccctcagtggaggaaaaggacggagtt
ttcaagcacatatggccgcaagaagcaaggctgaggaacctgacctacgcatcccaagtg
tacatagacatagagcagcagacgttcctaaacgaagaaggaaacctggtgcaaacggac
tcgacagtgtacccgagagtgccgctgtgcagaataccgatgatgctgaagtcggcctat
tgttggaccaagggactcactgaacacgatttgtcggacataggagagtgcgtgtttgac
cagggagggtacttcgtggtcaacggaggagagagagtgctgatagcgcaggaaaggatg
gcaaacaacttcgtctacgtatttaataaaaaaaatcaaaagtactcggcagtagcacag
ctgagatcgcagccggacttttcgcaaggagtgacctcgttctcaatcatgatactgaac
tcacaactggcaaaaaataagatgctggcagcactgccgtacgtgaagggagacgtccca
gtgccgatattgttcagagcactgggctgtatttcggacagagacatactgcagagaata
gtgtacgacttctcggacacgcaaatgttgtcgctaatgaggtcgacactggaggaatgt
tcagagtacacatcgcaagaacaatgcctagactatataggtaaaagagggcccacagta
ggagcgccgctggaagcacgcatacaatacgcgaaggacctgctgagaaggcacttcctg
ccacacgtgggaacagaagtaggctcggagtcaaaaaagtgtttctacgtgggatacatg
atacacagactgctcctaaaccaactagggagaataaacgaggatgacagggagcatttt
ggaaaaaagaggttggatttggcaggagcactgatggcaagtagcttcggagcactcttt
agaaagctggcgaaggacgtgaagaagctgctgcaaaaccaaatagactcaggaaggtcg
tttgacgtggcaggagcaataaagtcgtgctcacagataacacaagggttacagtaccag
ttgctgacaggaaactggggaagagacaaggaaggaaacgtagtgaggacgggagtatcg
caagtgctcaacagattgacgttcgcgtcgtacctgtcgcacctgaggaggctgaacacg
ccactaggaagagaagggaaaatggcaaagccaaggcagctgcacaacacgcactgggga
atgatatgcccagcagagacgccggaaggacaagcagtgggcctggtgaaaaacctggcg
ctcatgtgctacatcagcgtgggaagcatgacgagcacgatcctggacttcctgctcgag
ttcggaatggactcgctggacgagatcagcccagtgctgataaaggacagagttaagata
tttctgaacggaacgtggataggagtcttcaaccagccggacgcactggtaaacctgctg
ctggagctgagacgcaagggaaacataagcagcgagacttcgatcgtgagggacatactg
tcgaacgagataaagatattcacggactcaggtcgctcgatgagaccactgtacatcgtg
gagaacaacagactgctgataacgaagaggcacgctctgatgatagaaaataatcagctc
aactggtcagggctacttgaaagtggagtggtggagtacatagactgcgaagaggaggag
atatgcatgatagcaatgttcccagacgacctgatcaacaacaacaactactgcaatagc
tacacgcactgcgaaatacacccgagcatgatactgggagtgtgtgcctcaatcataccc
ttcccggaccagaaccagagcccaaggaacacgtatcagtcggcaatgggaaagcaggcg
atgggagtgtacagcacaaactataacctgagaatggacacgctgagccacgtgctatac
tacccgcagaagccgctggtgtgcacgaggtcaatggagttcctgaggttcagagagctg
ccagcaggaatcaactcgatagtggcaattatgtgctacacaggatacaaccaagaggat
tcactgatcatgaaccagtcgtcaattgacagaggactgtttagatcagtgttcaacaga
acgtactcgtcagaggagaagtacctgggaagcacagtgatagagtcgtttacgaagccg
acggcgacaagtaactttttgaacctgaagagaggagattactcgaagctggacaacgat
gggctgatagagccaggaagcagatcggacccgaacaacccgaactacccagcagaaatg
aacctgagaatggactgcagctgctgcctgagaccgaacgaaaacggagtggtggacaac
gtgttgctaacagttaacaacaagggctgcaagttcacaaaggtgaaggtgaggagcgtg
agagtgccacaaataggagacaagttcgcaagcaggcacggacagaagggaacgatagga
atgacgttcagaatggaagacctgccgtttacatgtgaaggaatagtgccggacatcatc
atgaacccgcacgcagtgccctcgagaatgacaatagggcacctaatagagtgcctgctg
ggaaaagtgggagcgctggtgggaatggagggtgacgcgacgccgttcagtaaaatgacg
ctggaacagatatcgagcagactgttcaagtgccactactcgaagtacggaaacgaggcg
ttccacaacgggttcacaggaaacctcatggcaagtaaaatattcgtaggaccaacgtac
taccagaggctgaagcacatggtggaggacaaaatacacgcgagagcaagaggaccggtg
acgatgctgacgaggcagccgacggaaggaaggtcgcgagacggaggactgaggttcgga
gaaatggagcgcgactgcatgatctcgcacggcgcggcgaagatgctgaaggagagactc
ttcgaccagtctgacgcgtacagagtgcacgtgtgcaacctctgcggactcctctcgata
gcgaacctgaacaacagctccttccagtgcacggcctgcgacaacaagacgcagatttcg
caggtgacgatcccgtacgcctgtaagctcctgctgcaggagctaatggcaatggcaata
tacccgaagctggtgctgacggaagcgtaa
DBGET
integrated database retrieval system
