Theileria orientalis: TOT_040000717
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Entry
TOT_040000717 CDS
T03460
Name
(RefSeq) splicing factor 3b subunit
KO
K12830
splicing factor 3B subunit 3
Organism
tot
Theileria orientalis
Pathway
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_040000717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tot03021
]
TOT_040000717
03041 Spliceosome [BR:
tot03041
]
TOT_040000717
03036 Chromosome and associated proteins [BR:
tot03036
]
TOT_040000717
Transcription machinery [BR:
tot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
TOT_040000717
Spliceosome [BR:
tot03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
TOT_040000717
Complex B
TOT_040000717
Complex C
U2 SnRNP specific factors
TOT_040000717
Chromosome and associated proteins [BR:
tot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
TOT_040000717
TFTC complex
TOT_040000717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Collagen
Abi_2
Motif
Other DBs
NCBI-GeneID:
20716764
NCBI-ProteinID:
XP_009692651
UniProt:
J7M4N7
LinkDB
All DBs
Position
4:join(1588108..1588438,1588524..1592011)
Genome browser
AA seq
1272 aa
AA seq
DB search
MPVLYHLTLKKPTGITTCVQGSFSAPKAQEIVVARSHILELYSLDSNGKLQTVASAEVFG
IVRAISAFRLTGSQKDYLVVGSDSGKLVILEFSLELKTFKRVHCETYGKTGVRRIVPGQY
LGVDPKGRAVMVGAVERQKFVYIMNRDSKANLTISSPLEAHKSHSVCFDLVGLEVGFENP
IFASIEQSYENVDSLQIDLDEELTDEALKKGVSFWEMDLGLNHVVKKVTLPVDLTAHMLV
PVPGGPGGVIVCCENFLVYKNLDHGDVYCAYPRRLEVSEHAKLLITSYAVHKMKDFFFIL
LQSEYGDLYKVDLNYDDAQVKEIVVRYFDTVELATSMCILRSGYLFVASEFGDHHVYQFT
DLGSNEKDPMCTSLHPHSKSAIIAFKPRVLQNLYETDKLPSLSSIVDMKVVDVMGTGDYE
FIMGCGRWYNSRLKSLRYGLSTEELAFNELPGRPRAVFTIKSLESNYDEFIIVSFQGNTL
VLSIGEAVEEVTDSFFLTSITTLHSCYMSNYHATESLEGRFEGGVSDGIFVQVHDSGFRY
SHGQVVKEWKVPSTKRVKLADNNLNQLLLVLSGGEVVYFELVDNDLEEVAKRNLSTEITC
VALQHTPASKAGERVRKGEFCCVGSIDNIIRVLKLDKTLKMCSSQLLSNNALPESLALVT
AETGSGSGGGSSGGLGESESYLYVGLNNGILIRNNVDSLGNLSDQESRFMGTKAVKLKLV
HYLQRQCLLLMTTKTYIVIPNYPTNTTNNMEILPLHLTTGSGGSYGTTVDSIDTFNSLLC
LNGFVCIMNNNLKIFKCIVNDDVFSESSVDLDYTPRKLVLMPSEAPSAGSLNYLLALVET
DHNSYSTEQAEEINKELSSITLESDCFELKAAKNYRAGPGKWSSCVRIVNPMNLETVVKL
LFTENEAATTAYTCVLNNKQLLVVATVKNVHLYPQNKVYGSSGASGANGSYGNSGITGAN
GTNGSSGSSGFSGSDQGYQDNDEVEGCIRVYEYNSNYSNLATSGMNIKLLHVTNTKGWIR
CFNNYENKLLLCAIGTRLRMYALGKKQLLLKGEHRSLTNYGFMDIKVIGSRIYCGDIRES
VQLLRIKFYGEETGEFEMTATSTGPRWLSTMELLDYSTVMAADKFDSVFVARVPNNEDVV
RNNYFEYQNQFHLSDLVTSLSKVKLNSVYGELVVYSTILGSLGAFVTFTSKDEVDFLQHL
EMLLANELDTLSGREAQMHRSYYFPVQNVIDGDLCELYFNLSSDLKAKIANQLNVKVAEV
VKKLKNIRNRVF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccagttttatatcatttgactttaaagaagccaacaggaataacaacgtgtgttcaa
gggagcttctcagcgccgaaggcccaggaaatagtggtcgcccgctcacatattttggaa
ctatacagcctggactctaatggaaagctgcaaacagtagcgagcgccgaggtgtttgga
atagttagagcaatttcagccttcagattgacgggctcacaaaaggactatctggtagtt
ggctcagatagcggaaagctggtgattctagagttttcgttggagttaaaaacatttaaa
agagtacactgtgaaacatatggaaagacaggtgtcagaaggatagtgccaggacagtac
ctgggagtggacccgaagggaagagcagtgatggtgggagcagtggagcgccagaagttc
gtgtacatcatgaacagagactcgaaggcgaacctgacaataagctcgccactggaagca
cacaagagccactcagtgtgctttgacctggtgggactggaggtgggattcgaaaaccca
atcttcgcgtcaatagaacagagctacgaaaacgtagatagcctgcaaatagacctggac
gaggagctgacggacgaggcactgaagaaaggagtgtcgttctgggagatggacctgggc
ctgaaccacgtggtgaagaaggtgacgctgccagtggacctgactgcgcacatgctggtg
ccggtgccgggaggaccaggaggagtgatagtgtgctgcgaaaacttcctggtctacaaa
aacctggatcacggagacgtgtactgcgcatacccgaggaggctggaggtttcggagcac
gcgaagctgctgatcacgagctacgcagtgcacaaaatgaaggacttcttcttcatactg
ctgcagtcggagtacggagacctgtacaaagtggacctgaactacgacgatgcacaagtt
aaggaaatagtggtgcgctactttgacacagtggagctggcgacgtcgatgtgcatactg
aggtcagggtacctcttcgtggcctcagagttcggagaccaccacgtgtaccagttcaca
gacctgggcagcaacgagaaggacccgatgtgcacgagtctgcacccgcactcgaagagc
gcgatcatagcgtttaagccgagagtgctgcaaaacctgtatgagacggacaaactgccg
agcctgagcagcatagtggacatgaaggtggtggacgtgatgggcacgggagactacgag
ttcatcatgggctgcggaaggtggtacaactcgcgcctgaagagcctgcgctacggactg
agcacggaggagctggcgttcaacgagctgccagggaggccgagagcagtgttcacaata
aagtcgctggaaagcaactacgacgagttcataatagtctcattccaaggaaacacgctg
gtgctctcaataggagaagcagtggaggaggtgacggactcgttcttcctgacatcgata
acgacgctgcactcgtgctacatgagtaactaccacgcgacggagagcctggagggaagg
ttcgaaggaggagtctcggacgggatattcgtgcaggtgcacgacagcggattcaggtac
tcgcacggacaagtggtgaaggagtggaaggtgccgagcacgaagagagtgaagttggca
gacaataacctgaaccagctgctgctggtgctctcaggaggagaggtggtgtactttgag
ttggtggacaacgacctggaggaagtggcgaagaggaacctgtcgacggagatcacgtgc
gtggcgctgcagcacacgccggcctcgaaggcaggagagagagtgaggaagggagagttc
tgctgcgtaggaagcatcgacaacataatcagagtgctgaagctggacaagacgctgaag
atgtgctcctcgcagctgctgagcaacaacgcgctgccggagtcgctggcgctggtgacg
gcggagacagggtcgggatctggaggagggagtagcggagggctgggcgagagtgagtcg
tacctgtacgtgggtctgaacaacggaatcctgataagaaacaacgtggacagcttgggg
aacctgagcgaccaggaaagcaggttcatgggcacgaaggcagtgaagctgaagctggtg
cactacctgcagagacagtgcctgctgctgatgacgacgaagacgtacatcgtgataccg
aattacccgacgaacacgacgaataacatggaaatactgccgctgcacctgacgacgggg
agcggaggaagttacggaacgacggtggacagcatagacacgttcaacagcctgctgtgc
ctgaacgggttcgtgtgcataatgaacaataacctgaagatattcaagtgcatagttaac
gacgacgtcttcagcgaaagcagcgtggacctggactacacgccgagaaagctggtgctg
atgccctcggaggcgccctcagcaggctcgctcaactacctgctggcgctggtggagacg
gaccacaacagctacagcacggagcaggcggaggaaatcaacaaggagttgagcagcata
acgctggagtcggactgcttcgagctgaaggcagcgaaaaactacagagcaggaccagga
aagtggagtagctgcgtgagaatagtgaacccgatgaacctggagacagtggtgaagctg
ctcttcacggaaaacgaggcagcaacgacagcatacacgtgcgtgctgaacaataagcag
ctgctggtggtagcaacagtgaagaacgtgcacctgtacccgcagaacaaggtctacggg
tcgagtggagcatcaggggcaaacggatcttatggaaattcgggaattacaggagccaac
ggaacgaatggatccagtggatccagtggattttcgggaagcgaccagggctaccaggac
aacgacgaggtcgaggggtgcataagagtgtacgagtacaactcgaactacagcaacctg
gcgacctcaggaatgaacattaagctgctgcatgtgacgaacacgaagggctggatacgc
tgcttcaacaactacgaaaacaaactgctgctctgcgcaataggaaccaggttgagaatg
tacgcactgggaaagaagcagctgctgctgaagggagaacacagaagcctgacgaactac
ggattcatggatatcaaggtgatcggaagcagaatatactgcggagacataagagaaagc
gtgcagctgctgagaatcaagttctacggagaggagacgggagagtttgagatgacagcg
acgagcacgggtccgaggtggctgtcgacgatggagctcctggactacagcacagtgatg
gcggcggacaagttcgactcagtattcgtggcgcgagtgccgaacaacgaggacgtggtg
aggaacaactactttgagtaccaaaaccagttccacctctcggacctggtgacctcgctg
agcaaagtgaagctgaacagcgtgtacggagaactcgtggtctacagcacgatcctgggc
agcctgggagcattcgtgacctttacgagcaaggacgaagtcgacttcctgcagcacctg
gaaatgctcctcgcaaacgagctggacacgctgagcgggcgggaggcgcagatgcacaga
agctactacttcccagtgcaaaacgttatcgacggggacctgtgcgagctgtactttaac
ctgagtagcgacctgaaggcgaagatagcgaaccagcttaacgtgaaggtggcggaggtg
gtgaagaagctgaagaacataagaaacagagtattctaa
DBGET
integrated database retrieval system