Theileria orientalis: TOT_040000950
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Entry
TOT_040000950 CDS
T03460
Name
(RefSeq) mRNA turnover/deadenylation component
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tot
Theileria orientalis
Pathway
tot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOT_040000950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_040000950
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TOT_040000950
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TOT_040000950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Urocanase_C
Motif
Other DBs
NCBI-GeneID:
20716970
NCBI-ProteinID:
XP_009692267
UniProt:
J4C4C9
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Position
4:complement(749151..750380)
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AA seq
409 aa
AA seq
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MDEELQIVDVWSDNLEDAFEKIRDLLELYPYVSIDTEFPGIVVRPTSYLEDYNYQTIKCN
VDLLNIIQLGLTFANSDGVSPNTASTWQFNFKFDLHHDMYAQNSIDMLKNSGIDFESHQR
RGIDLVHFGELIMSSGLVMNEEIVWISFHGSYDFAYLLKLLTCTNLPSNQSRFFELLHDF
FPSLYDIKFLLNERSIELSGRLSLQKLADHLDVKRVGLQHQAGSDSLVTSGTFFKLMQKY
FENKLDDQKYQGIIYGLGKSSPATYNPSLMEKEMFQPAPLQINIPNGHGTANYTTINHAN
GTSSSINSNNGASIVNIQSGMGGGVGTSMATGMGATMNADMANNVGMMNLNNGVSYNNYY
GAAAANTTYYKWNTLQNNVIYDSPFAKPKDTPILSDVSLYDKKFHHNVL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacttcaaatagttgacgtgtggtctgacaacttagaagatgcatttgag
aagattcgagatttgcttgaactttacccctacgtgtcgatagatacagaattccccggt
atagtcgtgagaccgaccagctacctggaggattataactaccaaacaataaaatgtaac
gttgatttgttaaatataatccaactcgggctcacatttgccaattcagatggagtatcg
cccaacacagcttcaacttggcaatttaacttcaagttcgacttacaccatgatatgtac
gcacaaaactcaatagatatgttaaaaaactccggaatagattttgagagtcatcagaga
aggggaatagacctagttcactttggcgaactaatcatgtcctcagggctggtaatgaac
gaagaaatagtatggatatcattccacggatcatacgatttcgcatatttgctaaagcta
ctgacgtgcacgaacctgccctcaaaccagtctagattttttgagctgctgcacgacttc
ttcccgtcgttgtacgacatcaagttcctgcttaacgaaagaagcatagagcttagcggt
agactgtcgctacaaaagttagcagaccacctggacgtaaagagagtaggactgcagcac
caagcaggaagcgattcattggtgacaagcggaacgttctttaagctgatgcaaaagtac
tttgaaaacaaactggatgaccagaagtaccaaggaataatatacggactgggtaaaagt
agcccggcgacatataacccgagcctaatggaaaaagaaatgttccagccagcgccactg
caaatcaatatccccaacggtcatggaacagcaaactacacaaccattaatcacgcaaat
ggaacaagtagtagcatcaactcgaacaacggagcgagcatagtcaacatacagagcggc
atgggaggaggcgtcggcacttcgatggctaccggaatgggagccacgatgaacgcagac
atggcgaacaacgtgggcatgatgaacctgaacaacggagtctcgtacaacaactactac
ggcgccgcagcagcaaacacgacctactacaagtggaacacgctgcaaaacaacgtgatc
tacgactcgccgttcgcgaagccgaaggacaccccaatactgtcagacgtatccctgtac
gataagaagttccaccacaacgtactgtga
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