Tenacibaculum ovolyticum: PG911_03425
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Entry
PG911_03425 CDS
T08793
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tov
Tenacibaculum ovolyticum
Brite
KEGG Orthology (KO) [BR:
tov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tov03032
]
PG911_03425 (gyrB)
03400 DNA repair and recombination proteins [BR:
tov03400
]
PG911_03425 (gyrB)
Enzymes [BR:
tov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PG911_03425 (gyrB)
DNA replication proteins [BR:
tov03032
]
Prokaryotic type
DNA Topoisomerases
PG911_03425 (gyrB)
DNA repair and recombination proteins [BR:
tov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PG911_03425 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WBX77324
LinkDB
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Position
780558..782495
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AA seq
645 aa
AA seq
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MSEEKKHNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMGGHCD
MIDVTINEDNSITTKDNGRGIPVGIHKKEGVSALQVVMTKIGAGGKFDKDSYKVSGGLHG
VGVSCVNALSDHLTATVHKEGKVWQQEYEKGKALYPVKTIGETDFTGTIVTFLPDKSIFA
QTTEYNYDTLSARLRELAYLNKGITITLTDKRNTDDEGNYIQETFRSTEGLPEFIKYLDS
TREQLTANVISMEGEKNGIPVEVAMVYNTSYSENLHSYVNNINTHEGGTHLSGFRRGLTH
TLKKYADESGLLKNVKFEIAGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVTSAVSQ
AVSEMLTDYLEENPNDAKTIVQKVILAAQARHAARKAREMVQRKTVMSIGGLPGKLSDCS
ETDPAQCEIFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIKNMF
TALGVSIGTEEDPRALNLSKIRYHKVVIMCDADVDGSHIATLILTFFFRYMREMVEQGYI
YIATPPLYLVKKGQKREYAWDDNQRDLIAQKLGGNVNIQRYKGLGEMNAEQLWDTTMNPE
FRTLRKVVIDSPTEADRVFSMLMGDEVPPRRDFIERNAKYANIDA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaaaaagcataattattctgccgatagtattcaggcgttagaaggtatg
gagcatgtaagaatgcgtccatcaatgtatattggagatgttggtgttagaggtttacat
catttagtatatgaagttgtagataactctattgatgaagcaatgggaggtcattgtgat
atgattgatgttacgattaatgaagataattctataacgaccaaagataatggtcgtggg
atcccagttggaattcataaaaaagaaggtgtttctgcattacaggttgtaatgacaaaa
attggagctggaggtaaatttgataaagattcatacaaagtttctggtggtttacacgga
gttggtgtaagttgtgtaaatgcattatcagatcatttaacagcaacagttcataaagaa
ggtaaggtttggcagcaagaatatgagaaaggaaaagctttatatcctgttaaaacaatt
ggagaaactgattttacaggtacaattgtaacatttttaccagataaatcaatatttgct
caaactacagagtataattatgatacattatctgcacgtttacgagagctagcttattta
aataaaggaattacaattactttaacagataagagaaatacagacgatgaaggtaattat
attcaagaaacttttagaagtacagaaggattacctgaatttatcaaatatttagatagt
actcgcgagcaattaacagcgaatgttatttcaatggaaggtgagaaaaatggtattccg
gttgaggtagcgatggtatataatacatcgtattctgaaaacttacattcatatgtgaat
aacattaatacacatgaaggaggaacacatttatctgggtttagacgtggattaacacat
acgttaaaaaaatacgcagatgaatctgggttacttaaaaatgtgaagtttgaaatagct
ggtgatgattttcgtgaaggtttaacagctattatttctgtgaaagtagcagaacctcag
tttgaagggcaaacaaaaacaaaattagggaatagagaggtaacttctgcggtttctcaa
gcagtgtcagaaatgttaactgactatttagaagaaaaccctaatgatgcaaaaacaatt
gttcagaaagtaattttagctgcacaggcacgtcatgctgcacgtaaagcgcgtgaaatg
gtacagcgtaaaactgtaatgagtattggtggtttacctggtaaattatctgattgttct
gaaacagatccagcacaatgtgaaattttcttagttgagggagattcggcaggtggaaca
gcaaaacaaggacgtgatcgtaattttcaagcgattttaccactacgtggaaaaatattg
aatgtagagaaagcgatgcaacataaagtttttgagaatgaagaaatcaaaaacatgttt
acagctttaggtgtttcaattggaacagaagaagacccgagagctttaaacttatctaaa
atacgttatcataaagtggttattatgtgtgatgccgatgtagatggtagtcatattgca
actttaattttaacttttttctttaggtacatgagagaaatggttgagcaaggatatatt
tatattgctactccacctttatacttagttaaaaaaggacagaaaagagaatatgcatgg
gatgataatcaacgtgatttaattgctcaaaaattaggaggtaatgtaaatatacaacgt
tataaaggtcttggagagatgaatgcggagcaattgtgggatactacaatgaaccctgaa
tttagaactttacgtaaggttgttattgatagtccaacagaagcagatagagtattctct
atgctaatgggagatgaggtgccacctcgtagagattttattgaacgtaatgcaaaatat
gcaaatattgatgcgtaa
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