Tenacibaculum ovolyticum: PG911_05240
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Entry
PG911_05240 CDS
T08793
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tov
Tenacibaculum ovolyticum
Pathway
tov03030
DNA replication
tov03430
Mismatch repair
tov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG911_05240 (holA)
03430 Mismatch repair
PG911_05240 (holA)
03440 Homologous recombination
PG911_05240 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tov03032
]
PG911_05240 (holA)
03400 DNA repair and recombination proteins [BR:
tov03400
]
PG911_05240 (holA)
Enzymes [BR:
tov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG911_05240 (holA)
DNA replication proteins [BR:
tov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG911_05240 (holA)
DNA repair and recombination proteins [BR:
tov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG911_05240 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
LAMB4
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
WBX77663
LinkDB
All DBs
Position
1197128..1198129
Genome browser
AA seq
333 aa
AA seq
DB search
MNEIKAIISDIKEGNIKPIYFLMGEEPYYIDKISDYIEKNVLDESEKGFNQVVMYGRDVT
IEEIMSSAKRYPMMADKQVIIVKEAQDLSRTIDKIEAYAANPQATTVLVFNYKYKKLDKR
KKSYKAIAKSGLIYESKKLYENQVADWIRRVLGGQKYNIEPKASQMLVEFLGTDLSKISN
ELDKLTSVLPKETIISDKHIEENIGISKDFNNFELRKAVGQKEVVKANRIINYFAQNPKN
NPLVMSISLLNSFFTQLLMYHGLKDKSKSSVAKNLGVSPYFVDDYNSAARNYPMRKVSQI
IGLLREADVKSKGVGASQSHSDILKELLFKILH
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaattaaagctatcatatcagacataaaagaaggaaacattaagcctatttat
tttttaatgggtgaagaaccttattatattgataaaatatctgattatattgaaaaaaat
gtacttgatgaatctgaaaaaggatttaatcaagtggtaatgtatggaagagatgtaaca
atagaagaaattatgtcgtctgccaagcgttacccaatgatggcagataaacaggtgatt
attgtaaaagaggcgcaagatttaagccgtacgatagataagattgaagcctatgcagca
aacccgcaagcaactactgttttagtttttaattacaagtataagaaattagataagaga
aaaaaatcatacaaggctattgctaagagcggattgatttatgagagcaagaaattatat
gagaatcaagttgcagactggattcgtagagttttaggaggtcaaaagtataatatcgaa
ccaaaagcatctcaaatgttagttgagtttttaggaacagatttaagtaaaatttctaat
gaattagataagttaacatctgtactgcctaaagaaactattatttcagacaaacatatt
gaagaaaatataggtatatctaaagactttaataattttgaattacgaaaagcagttggt
caaaaagaggtggtaaaagcaaatagaattattaattattttgcacaaaatcctaaaaat
aaccctttggtaatgagtatatccttgctaaatagtttttttacgcaactattaatgtac
cacggtttaaaagataaatcaaaatcatcagtagccaagaatttaggagtaagtccttat
tttgttgatgattataattctgctgcaaggaactacccaatgcgaaaagtatcacagata
ataggcttgttacgagaagcagatgttaaaagtaaaggagtaggagctagtcaatctcat
agtgatattttaaaagaattattatttaaaattttacattaa
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