Tenacibaculum ovolyticum: PG911_05280
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Entry
PG911_05280 CDS
T08793
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
tov
Tenacibaculum ovolyticum
Brite
KEGG Orthology (KO) [BR:
tov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tov03021
]
PG911_05280 (rapA)
Transcription machinery [BR:
tov03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PG911_05280 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
SNF2-rel_dom
Tudor_1_RapA
Helicase_C
ResIII
Tudor_RapA
DEAD
Helicase_C_2
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
WBX77671
LinkDB
All DBs
Position
complement(1209858..1212683)
Genome browser
AA seq
941 aa
AA seq
DB search
MTVFFPNQRYTSKGEPELGVGILTNSDKGKVQLYFPTADETRMYALENAPLQRVVFKPGD
TIKDTENQPLVIKRVEEEDNLYVYYGKDKKISEAALGDVSVIHGVDDRLFMGDVDTPKAF
ALRRETLQHEYERRLSPVNGFVGGRIALIPHQLYIAHEVSSRYAPRVLLSDQVGLGKTIE
ACLILHRLLVSGRISRVLILVPESLVHQWFVEVLRRFNMWFHIFDEERCASLDESAPDGN
PFLDNQLIICSTEFLANSAKRTKQALTAGWDMLVVDEAHNLEWSVNKSSTEYSIVELLSK
VAKGLLLLTATPEQLGVESHFARLRLLDPNRYANYDDFVNESSDHKTIANIVEKLHLEKD
LNTKDTTILKSLFPKENLKAITKGKSVVKDNLIENLLDQHGPGRVLFRNTRATMSGFPKR
KAHLISLEPTKDKELWMERLSNEFTHEVTPSETTNKQQFWFAKDPRVEWLLTTIKEIHPA
KILLICKSKEKVLALEKALVKHANLKTAVFHEDLTIVQRDKNAAWFSEANGAQILLCSEI
GSEGRNFQFAHHLILFDLPLHPELLEQRIGRLDRIGQTEDIHIHIPYLANSKQHLLAQWF
HKGLNAFESNIEGGNKIAELFGNRLLTLLKTQENTVNNSEIETLISDTSSFQTALLKNLA
DGRDRLLEMNSFRPKVAEKLIKQIKAADKDKSLEKYLTKVFRHFDIEMEDRPSRTYYLKP
TSIITETFPSIPQEGVSVTFNRKHAFSREEISFLSWDHPMITDAIDVVLSSGTGSTSYGV
LKGTKSPGLLLEIIFILETPTGQNIYVDRFLPNTPIRVVVDHIGTKVTDEYSIELLDKKL
STGQIDPLLDNETLVETLLPNMIKVATEIAAKQRTKEIANGLARMNRTLKHEIDRLKILQ
GNNNNIRPEEIETALNEQLALTSLIKNARIRMDAIQLIRKE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgactgttttttttcctaatcaaagatatacgagtaaaggtgaacctgaattaggtgtt
ggtattttaacaaactccgacaaaggaaaagtacaattgtattttcctacagctgatgaa
acacgaatgtacgctcttgaaaacgctcctttgcaacgcgttgtttttaaaccgggcgat
acgataaaagacaccgaaaatcagccattagttataaaacgtgttgaggaagaagacaat
ctgtatgtctattacggaaaagacaaaaaaatatcggaagcagcacttggcgatgtatcg
gtaattcacggagtagatgatagactttttatgggcgatgtagatactcctaaagccttt
gctttacgtagagaaaccttacaacacgaatatgagagaagattatcgcctgtaaacgga
tttgttggtggtaggatagcacttattccgcatcaattatacattgcacatgaagtaagt
tcgagatatgcacctcgtgtattgttatccgatcaagttggtcttggaaaaaccattgaa
gcttgtttaattttacaccgtttattagtaagtggtcgaatttcgagagtactaatttta
gttccagaatcattagtacatcaatggtttgttgaggttttacgtcgttttaatatgtgg
tttcatatttttgatgaggaacgctgtgcttcacttgatgaaagtgcgccagatggtaat
ccctttctagacaatcaacttattatttgtagtacagaatttttagcaaattccgcaaag
cgaaccaaacaagcattaactgctggttgggatatgcttgtagtagatgaagctcataat
ttagaatggtcggttaacaaatctagtactgaatatagtattgtggaattgttaagcaaa
gtagcaaaaggattattacttcttacagcgactccagaacaattgggcgtagaaagtcat
tttgcccgactccgattattagaccctaacaggtatgccaattacgatgattttgtaaat
gaatcttctgatcataaaactattgctaatattgttgaaaaattgcatctcgaaaaagat
ttgaatacgaaggataccacaattttaaaatctctttttccgaaagaaaacctaaaagca
ataacaaaagggaaaagtgtagtaaaggataaccttattgagaatttattggatcaacat
ggtcctggtagagtattattcagaaataccagagctaccatgagtggatttccaaaacga
aaagcacatcttatttctttagagcctacaaaagataaagaactctggatggagcgttta
agcaatgagtttacgcatgaagtaactccaagcgaaacaacgaataaacaacaattttgg
tttgctaaagatccgcgtgttgaatggttattaaccacaattaaagaaattcatcctgca
aaaatattactcatctgtaagagtaaagaaaaagtactggcactagaaaaagcattagtt
aaacatgctaatttaaaaacagccgtatttcatgaagatcttaccatagtacaacgagat
aaaaatgcagcatggttttctgaagcaaatggagcacaaatactactttgttctgaaata
ggaagcgaaggacgaaattttcaattcgcgcatcatcttattttattcgacctaccgctg
catcctgaattattagaacaacgaataggtcgtttagatagaatcggacaaactgaagat
atccatattcatatcccctaccttgctaatagtaaacaacatttgcttgcgcagtggttt
cataaaggcttaaacgcttttgaaagtaatattgaaggtggaaataaaattgctgaatta
tttggtaatcgattgcttacgcttttaaaaacacaagaaaacacggttaataattcagaa
atagaaacgttgatttctgatacttctagttttcaaacagcgcttttaaaaaatttagct
gatggtcgtgatcgattgttagaaatgaattcttttcgccctaaagtagctgaaaaatta
attaaacaaattaaagcagcagataaagataaaagtctcgaaaagtatttaacaaaagtc
tttcgtcattttgatattgaaatggaagatcgcccatctcgaacttactatttaaaacct
acttctataattaccgaaacatttccatcaataccgcaagagggtgtatctgttacattt
aacagaaaacatgcctttagtagagaagaaataagttttcttagttgggatcatccaatg
ataaccgatgctattgatgttgttttaagctcaggaactggtagcactagttacggtgtt
ttaaaaggaaccaaaagtccaggtcttttattagaaattatttttattcttgaaacacca
accggacaaaacatttatgtagatcgttttttaccaaacacaccaataagagttgttgta
gatcatattggcacaaaagtaacagacgaatattctattgaactcttagataaaaaatta
agtacggggcaaatagatcctttacttgataatgaaacattggttgaaacgcttttacca
aatatgattaaagttgctacagaaattgcagcaaaacaacgaactaaagagatagcaaac
ggactagctcgaatgaatcgcactttgaagcatgaaatagatcgtttaaaaatattacaa
ggcaataataacaatattagacctgaagaaattgaaacagcattgaacgaacaactagca
ttaacatcacttattaaaaatgcacgcatacgaatggatgctattcaattaattagaaaa
gaataa
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