Tenacibaculum ovolyticum: PG911_12905
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Entry
PG911_12905 CDS
T08793
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tov
Tenacibaculum ovolyticum
Pathway
tov03030
DNA replication
tov03430
Mismatch repair
tov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG911_12905
03430 Mismatch repair
PG911_12905
03440 Homologous recombination
PG911_12905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tov03032
]
PG911_12905
03400 DNA repair and recombination proteins [BR:
tov03400
]
PG911_12905
Enzymes [BR:
tov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG911_12905
DNA replication proteins [BR:
tov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG911_12905
DNA repair and recombination proteins [BR:
tov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG911_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Rv2179c-like
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WBX75549
LinkDB
All DBs
Position
2892886..2893983
Genome browser
AA seq
365 aa
AA seq
DB search
MYAVLDIETTGGKFNEEGITEIAIHKFDGHQVVDQFISLVNPEREIQEFVVKLTGINSKM
LRNAPKFHEVAKRIIEITKGCIIIAHNASFDYRILRTEYNRLGFDFQRNTLCTVALSKKL
IPEAPSHSLGKLCRFIGIPMSDRHRANGDALATVQLFKLLLEKDVDKSIVQQSIKYSDGR
QQKQRFTKILDKLPEKQGLFYVHSEHGTIIYVGRGKNIKHEVNKLFLKSTPKALKIIKRV
NEVTYEETGNPLFTRLKYHLELTKLRPKFNVIRKRKISDKNFNHDNLLIIDKGRTPEEHA
VILIEKNSVLGYAYTNFAFQENQLNILKSMLTPIENADLAKTIIKNYLLKNKVGKIVRLQ
IENDL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcagttttagatattgaaacaacaggaggtaaatttaatgaagaaggaattaca
gaaattgctattcataagtttgatggtcatcaagttgttgaccaatttattagtttagta
aacccagagagagaaattcaagaatttgttgttaaactaacaggtattaatagtaaaatg
cttcgaaacgcacctaaatttcatgaagttgcaaaacgaattattgaaattactaaaggc
tgtattatcatagctcacaatgctagtttcgattatcgaattttacgtacagaatataac
cgtttaggatttgactttcaaagaaacaccctttgtaccgtagcacttagtaaaaaacta
attcccgaagctccttcacacagtttaggtaaactatgtagatttattggaattccaatg
tcagataggcatagagcaaatggagatgccttggcaactgtgcaattatttaaattactc
ttagaaaaagacgttgacaaaagcattgttcagcaatctataaagtattcagacggtagg
caacaaaagcaacgttttacaaaaatattagacaaattacccgaaaagcaaggactcttt
tatgtacacagtgaacatggtactattatatatgtaggtagaggtaaaaacataaaacac
gaagtaaataagctgtttttaaaaagtactcctaaagctttaaaaataataaaaagagtt
aatgaagttacctacgaagaaacaggaaaccctctttttactagattaaaatatcattta
gaacttacgaaattaagacctaaatttaatgttattcgtaaacgaaaaatttctgataag
aattttaatcatgataatttattaattatagacaaaggaagaacacctgaagaacatgct
gttattttaatcgaaaaaaacagcgttttaggatatgcttataccaactttgcttttcaa
gaaaatcaattaaacatcttaaaatcgatgttaacgcctattgaaaacgctgatttagca
aagacaataattaaaaattacttacttaaaaataaagtagggaaaattgtacgcttacaa
attgaaaatgatttataa
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