Tenacibaculum ovolyticum: PG911_16015
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Entry
PG911_16015 CDS
T08793
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tov
Tenacibaculum ovolyticum
Pathway
tov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG911_16015 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tov03021
]
PG911_16015 (rho)
03019 Messenger RNA biogenesis [BR:
tov03019
]
PG911_16015 (rho)
Transcription machinery [BR:
tov03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PG911_16015 (rho)
Messenger RNA biogenesis [BR:
tov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PG911_16015 (rho)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
Mor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WBX76121
LinkDB
All DBs
Position
complement(3536871..3538598)
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AA seq
575 aa
AA seq
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MFEISELKTKKLTDLQAIAKTIGLTKVSQLKKLDLVYKILDAQAESSANEAKPIEEKTKR
KRITKTEEAKKQPEVEVVDKLKVKAEKTEVVEKVVKKEVEVVKKSQETKTGGEKQVVKEK
EQPVEVKKPKPKPRPRPRKEVEAKKQVPTPREEVEAKKQVPRPRKEVEAKKPQHSNNNKS
QHKNQNTNKSRNKTGNKYRDPDFEFDGIIESEGVLEMMPDGYGFLRSSDYNYLSSPDDIY
VSQSQIKLFGLKTGDTVLGNVRPPKEGEKYFPLIRVSKINGLNPNIVRDRVSFEHLTPLF
AEEKFNLAERGSSLSTRIIDIFSPIGKGQRGMIVAQPKTGKTMLLKDVANAIAANHPEVY
QIVLLIDERPEEVTDMKRNVRGEVVASTFDEPADKHVRVANIVLEKAKRLVECGHDVVIL
LDSITRLARAYNTVAPASGKILSGGIDANALHKPKRFFGAARNIENGGSLTIIATALTET
GSKMDEVIFEEFKGTGNMELQLDRNISNRRIYPAIDLIKSSTRRDDLLLDEKTVQRMWVL
RKYLADMNPVEAMTFINDRIRVSKNNDEFLISMNG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagatttcggaattaaaaactaaaaaattaacagacttacaagcaattgcaaaa
accataggtttaacaaaagttagtcagttaaaaaaattagatttagtttataaaatttta
gatgcacaggctgagtctagtgctaatgaagctaaacctattgaagaaaaaactaaaaga
aaaagaataacaaaaactgaggaagctaaaaagcaaccagaagtggaggttgttgataaa
ctgaaggttaaagctgaaaagactgaagtcgttgaaaaggttgtaaagaaagaggttgaa
gttgttaagaaatctcaagaaactaaaactgggggtgaaaaacaagttgttaaagaaaaa
gaacaaccggttgaggttaaaaagccaaaaccaaaaccaagaccaagaccaagaaaagag
gtagaagctaaaaaacaagtgccaactccgagagaagaggttgaagcgaaaaagcaagtt
ccaagaccaagaaaagaagttgaggcgaaaaaacctcaacattctaacaataataaatcg
cagcataaaaatcaaaacacaaataagtcacgtaataaaacagggaataaatatagagac
cctgattttgaatttgatggaattattgaaagtgaaggtgtgcttgagatgatgcctgat
ggatatggttttttacgttcatcagattataattatttatcatcaccagatgatatttat
gtatctcaatcgcaaataaaactttttggattaaaaacaggagatactgttttaggtaat
gtacgcccgccaaaagaaggtgaaaaatacttccctttaattagggtatcgaaaataaat
ggattaaatccaaatattgttcgtgatcgtgtgtcatttgagcatttaacaccgttgttt
gctgaagagaaattcaacttggctgagagaggaagctcattatcaactagaataattgat
atcttttcacctataggtaaaggtcagcgtggtatgattgtagcgcagcctaaaacaggt
aaaacaatgttactaaaggacgttgcaaatgctatagcagcaaatcatcctgaggtgtat
caaattgttttattaattgatgaaagacctgaggaggttactgatatgaaacgtaatgtt
cgtggtgaagtagttgcatctacttttgatgaaccagcagataaacatgtacgtgttgca
aacattgttttggaaaaagcaaaacgtttagtagaatgcggtcatgatgtagtgatttta
ttagattcaattactcgtttagcacgagcttataacaccgttgcaccagcatcagggaaa
atattatcaggaggtattgatgcaaatgcattacataagccaaagcgtttctttggggcg
gctcgtaatattgaaaacggaggttcgttaactattattgcaactgcgcttactgaaaca
ggttctaaaatggatgaagtaatctttgaagaatttaaaggtactggtaacatggagtta
caattagatcgtaatatttctaatcgtagaatttatccagcaattgatttaattaaatca
agcacacgtcgtgatgatttattgttagatgagaaaacagtacagcgtatgtgggtattg
cgtaaatatttagcagatatgaatcctgttgaggcaatgacatttattaatgatagaata
agagtttctaaaaataacgatgaatttttaatttctatgaacgggtag
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