Tenacibaculum ovolyticum: PG911_16825
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Entry
PG911_16825 CDS
T08793
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tov
Tenacibaculum ovolyticum
Pathway
tov03030
DNA replication
tov03430
Mismatch repair
tov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG911_16825 (dnaE)
03430 Mismatch repair
PG911_16825 (dnaE)
03440 Homologous recombination
PG911_16825 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tov03032
]
PG911_16825 (dnaE)
03400 DNA repair and recombination proteins [BR:
tov03400
]
PG911_16825 (dnaE)
Enzymes [BR:
tov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG911_16825 (dnaE)
DNA replication proteins [BR:
tov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG911_16825 (dnaE)
DNA repair and recombination proteins [BR:
tov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG911_16825 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
WBX76267
LinkDB
All DBs
Position
3719761..3724134
Genome browser
AA seq
1457 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTNNWPRATQIAWQLHDELGNLIEHNDFLIIPDGYNIPY
DAERIHGISTDLAKEQGIELSEGLALFNEALSKTKFIVGQNLAFDINIMGCEFHRLGVEN
NLTELPVLDTCTEHTAKMCQIPGGRGGKFKLPTLTELHNHLFGIGFGDAHNATADVEATT
RCFLELIRLRQFTKEQLDVSDDFFDSYTENNPSAIQVIGLEHLNLKRESEKIRNRIEKAK
GVKTTINTNESLAELENVQFAHLHNHTQYSVLQSTIQIGNIVKAAAKDNMSAVAMTDTGN
MMAAFHFVQAVLNHNKAVESANKEAIEKGEEPTQKTLKPIVGCEFNICEDHLNKSQKDNG
YQVVLLAKNKKGYHNLAKMSSIAFVDGFYYIPRIDKKVVEQYKEDIIVLTGSLYGEVPSK
ILNVGEAQAEEALLWWKEQFGADLYIELMRHNQDDERVVNETLLKFSEKHVIKTVASNNT
FYLSQEDANAHDILLCVKDGEKQATPKGRGRGYRYGLPNDQYYFKSSEEMKILFADLPEA
IINIQEIVDKIEPYTLARDVLLPAFDIADEFKDEKDNEDGGKRGENNFLRHLTYVGAKKR
YGEITDSIRERLDFELEVIEKTGYPGYFLIVEDFIREARNMDVAVGPGRGSAAGSVVAYC
LWITNIDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRGRVMDYVIDKYGANQVAQIITY
GTMAAKSSIRDTARVLDLPLFEADRIAKLIPGMKLKKIFSLDEKTLKEKLRAEEIELVNE
LKRLSNGNDLMAETINKARILEGSVRNTGIHACGVIITPDDITKFVPVALAKDSDMYVTQ
FDNSVVEDAGLLKMDFLGLKTLTLIKDTVKIVKARHDVLLDPENFPLDDIKTYELFQRGE
TVGIFQYESPGMQKHMRSLKPTVFEDLIAMNALYRPGPMEYIPSFIQRKHGDEEIEYDLP
AMEEYLAETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKFVEQA
SANGHDAKKLEKIWTDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNM
NDIKSVSFFMEECKRSGITVLGPDVNESYSKFSVNKEGAIRFGMAAIKGVGASAVRAIIS
EREENGHYSSVFDMSKRVDLRVANKKAFEGLILAGGFDSFTNTHRAQYFVEDEKSQKFIE
KALRFGNKFQENQNSSQVSLFGGGSEEEMPEPIIPICDTWGTMELLGKEKEVVGIYISAH
PLDDFKNELKFCNVALSAYNDLPKYEGMALSFGGIVTDVQHRVSKAGKGWATFFIEDYTE
NFEFRIFGEEYLKFKHFLVPNSFLFVKTMVKPGWTNKEGIKGEPRVSFNEFLLLHDIMDK
MCKKVTLKMSLKEVSENRIKDLQHLFATNRGSQGLHFTIWDTEEKIELSLPSRNTKIKIS
NEFLKTLDEQHINYKLN
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatatttgatactgaaaccaccggattacctaaaagctggaatgctccaata
actgacactaataattggcctagagcaacacaaattgcttggcaattacatgatgaactt
ggtaatttaattgagcataacgattttcttattatacctgacggatataacattccttat
gatgctgaaagaattcacggtatttctaccgatttagccaaagaacaaggtattgaactc
tccgaaggtttagctttatttaatgaagcgttaagtaaaacaaaattcatcgttggtcaa
aaccttgcttttgatattaatattatgggatgtgaattccatcgtttgggcgttgaaaac
aatttaactgaactacctgttttagatacttgtacagagcatactgctaaaatgtgtcaa
attcctggtggtcgtggtggtaaatttaagcttcccacactaaccgaattacacaatcat
ctttttggaattggttttggtgatgcacacaatgcaactgccgatgtagaggctactacc
cgatgttttttagaattaattcgtttacgtcagtttaccaaagaacaacttgatgtttca
gatgatttctttgatagctatacagaaaacaacccaagtgcaattcaagtaattggttta
gaacacttaaatcttaaaagagaaagcgagaagattcgcaatagaattgagaaagctaaa
ggtgtaaaaacaacaataaataccaatgaaagtttagctgaattagaaaatgttcagttt
gcccaccttcataatcatacacaatactcagtattacaatcaaccatacaaattggtaat
attgtaaaagctgccgcaaaagataacatgtcggcagttgcaatgactgatacaggaaat
atgatggctgcttttcattttgtccaagcagttttaaatcataataaagctgtagaatca
gcaaataaagaagctattgaaaaaggtgaagaacctactcaaaaaacattaaaacctatt
gttgggtgtgaatttaatatttgtgaagatcatttaaataaaagtcaaaaagacaatggt
tatcaagttgttttattagcaaaaaacaaaaaaggataccacaacctagcaaaaatgtca
tcaattgcctttgttgatggtttttactacatccctagaattgataagaaagtagttgaa
caatataaagaagatatcattgtacttactggaagtttgtatggtgaagttcctagtaaa
attttaaatgttggtgaagcgcaagcagaagaagctttactttggtggaaagaacaattt
ggtgctgacttatatattgagttaatgcgtcacaaccaagatgatgaaagagttgtaaat
gaaacacttttaaaattctcagaaaaacatgttataaaaactgttgcttcaaataatact
ttttacctaagtcaagaagatgcaaatgcccacgatattctattgtgtgtaaaagacgga
gaaaaacaagcaacaccaaaaggaagaggaagagggtatcgttatggcttgccaaatgat
caatactacttcaaatcttctgaagaaatgaaaattttgtttgctgatcttcctgaagca
atcattaacattcaagaaattgtagataaaattgaaccgtatacattagctcgtgatgtt
ttattacccgcttttgatattgctgatgagtttaaagatgaaaaagataatgaagatggt
ggtaaacgaggtgagaataacttcttacgccatttaacatatgtaggtgcaaaaaaacga
tatggtgaaataaccgatagtattcgtgaacgtttagattttgaattggaagtaattgag
aaaactgggtatcctggatatttcttaattgttgaagattttattagagaagcgagaaat
atggatgttgccgttggtcctgggcgtggttctgctgcaggatcggtagttgcctattgt
ttatggattaccaatatagaccctattaaatacgatttactttttgagcgtttcttaaat
cctgaacgtgtatcaatgcccgatattgatattgattttgatgatgaaggtcgtggtaga
gtaatggattatgtaattgataaatatggtgcgaatcaagtagcacaaattattacttac
ggtaccatggctgcaaaatcttcaattagagatacagcacgtgtattagatttacctctt
tttgaagccgatagaattgctaagttaattccaggaatgaaactgaagaaaatattttct
ttagatgaaaaaacactgaaagaaaaacttagagctgaagaaattgaattagtaaatgaa
ttaaaaagactttctaacggaaatgatttaatggctgaaaccattaataaagctcgaatt
ttagaaggttctgttcgtaatacaggtattcatgcttgtggtgtaattattacgcccgac
gatattacaaaattcgtacctgttgcgttagcaaaagattctgacatgtatgttacgcag
tttgacaactcggttgttgaagatgctggactactgaaaatggatttcttgggattaaaa
acgttaacgctaattaaagacaccgttaaaattgtaaaagcacgacacgatgttctttta
gatcctgaaaattttccgcttgatgatataaaaacctacgagctattccaaagaggagaa
actgttggtatttttcaatatgaatctccaggaatgcaaaaacacatgcgctctttaaaa
cctactgtttttgaagatttaattgccatgaatgcattgtatcgtccgggaccaatggaa
tatattccttcttttatccaaagaaaacatggagacgaagaaatcgagtatgatttacct
gcaatggaagaataccttgcagaaacatacggaattacagtataccaagagcaggtaatg
ttactctctcagaaattagctgatttcaccaaaggtgaagccgatgttttacgtaaggca
atgggtaaaaaacaaattgcggttttagataaaatgaaacctaaatttgttgaacaagct
agtgcaaatggtcatgatgctaaaaaattagagaaaatttggacagactgggaggctttc
gcatcctatgcatttaacaaatctcactctacttgctatgcttggattgcatatcaaaca
gcttatttaaaagcacattatcctgctgaatatatggctgccgtactttctaataacatg
aatgatataaaatctgtatcatttttcatggaggaatgtaaacgttccggaattaccgtt
ttagggccagatgtaaatgaatcatactctaaattctcagtaaataaagaaggtgctatt
cgttttggaatggctgctattaaaggggttggagcttcagctgttcgtgcaataataagt
gaacgcgaagaaaacggtcattattcttctgtttttgacatgtcaaaacgtgtcgatcta
cgtgtagcgaataaaaaagcctttgaaggtttaattttagcaggaggttttgattctttt
acaaacactcatagagctcaatattttgttgaagatgaaaaaagtcaaaaatttatagaa
aaagcattacgttttggtaataagtttcaagaaaatcaaaactcttctcaagtctcatta
tttggtggaggctctgaagaagaaatgccagaacctattattcctatttgtgatacttgg
ggtactatggagttattaggaaaagaaaaagaagttgttggtatttatatttcagcacat
ccattagatgattttaaaaatgaattaaaattctgtaatgttgcattatctgcctataac
gatttacctaaatatgaaggaatggcattatcatttggtggtattgttaccgatgtacaa
catcgtgtctctaaagcaggaaaaggatgggctactttttttattgaagattatactgaa
aattttgaatttagaatttttggtgaagaatatttaaaatttaaacatttcttggttcct
aattcttttctttttgtaaaaaccatggtaaaacctggctggacgaataaagaaggaata
aaaggtgaaccaagagttagttttaatgagtttttattacttcatgacatcatggataaa
atgtgtaaaaaagttacactaaaaatgagcctaaaagaagtaagcgaaaacagaatcaaa
gacttacaacatttattcgcaaccaatagaggtagccaagggttacattttactatttgg
gatactgaagaaaaaatagaattaagcttacctagtagaaatacaaaaattaaaatttct
aatgaatttttaaaaacattagatgagcaacatattaattataaactaaactaa
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