Tomitella fengzijianii: FO059_03420
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Entry
FO059_03420 CDS
T06118
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
toy
Tomitella fengzijianii
Pathway
toy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
toy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FO059_03420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toy03021
]
FO059_03420
03400 DNA repair and recombination proteins [BR:
toy03400
]
FO059_03420
Enzymes [BR:
toy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FO059_03420
Transcription machinery [BR:
toy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FO059_03420
DNA repair and recombination proteins [BR:
toy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FO059_03420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QDQ96556
UniProt:
A0A516X0D7
LinkDB
All DBs
Position
743969..747949
Genome browser
AA seq
1326 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDEELRHNELSTLEAEMTVDRKAVEDQRDADLEERAQKLESD
LAELEAEGAKADARRKVKDAGEREMRHIRERAQRELDRLDEIWTTFTKLAPKDLIVDEGL
YREIEDRFGEYFEGTMGAEAIEKLIEAFDIAAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQSSGNDPAGMVLNAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVINEHPVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHVPLSSEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYHLTREVEDADGSYT
PSATDQAATGVYSTPAEAIMAVDLGELTMQARIRVRLDRQRPPAEIEAERFPDGWKPGDS
WLAETTLGRILFNELLPVDYPFIDEVMPKKRQAAIINDLAERYPMITVAQTVDKLKDTGF
YWATRSGVTVAMSDVLVPPQKTEILEAYEKRADQTEKLYQRGAVGESERNSELVKIWSEA
TEEVAKAMEANYPDDNPIPMIVKSGAAGNMTQVRSLSGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCATPRGITIAI
AETELDAAGEPTGNLVRDAHVETAAFARTLASDALDADGNVVVAKDSDLGDPAIEKLLAA
GVTKVKVRSVLTCATGTGVCAKCYGRSMATGQLVDIGEAVGIVAAQSIGEPGTQLTMRTF
HQGGAGGDDITGGLPRVQELFEARVPKGKAPISEQSGRVRIEDDDRFYTITVTPDDGGEE
VVYDKLSKRQRLAKHRPEGEQYERVLQDGDHVEVGQQLLEGAADPHEVLRIMGPRDVQVH
LVNEVQEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLVERADFDATNKRA
VQEGQEPSAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINRRSDSLVGLKENVI
IGKLIPAGTGINRYRNIQVQPTEEARAAAYAVPAYDDAFYGPDGGFGSATGAAVPLDDFP
FSGDYR
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgaactccggatcggtctcgccaccgccgaggacatc
cgcaactggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaaaggcatcatctgcgagcgctgcggcgtg
gaggtcacgcgcgccaaggtgcgccgcgagcgcatgggccacatcgagctcgctgcgccg
gtcacccacatctggtacttcaagggcgtgccgagccgcctcggctacctgctggacctg
gccccgaaggatctcgagaagatcatctacttcgcggcctacgtgatcacggcggtcgac
gaggaactgcgtcacaacgagctgtcgacgctcgaggccgagatgacggtggaccgcaag
gcggtcgaggatcagcgtgacgccgacctggaggagcgggcccagaagctcgagtccgac
ctggccgagctcgaggccgagggcgccaaggccgacgcgcggcgcaaggtcaaggacgcc
ggcgagcgcgagatgcggcacatccgcgagcgtgcgcagcgtgagctggaccgtctcgat
gagatctggacgaccttcaccaagctcgcccccaaggacctcatcgtcgatgaggggctc
taccgggaaatcgaagaccgcttcggcgagtacttcgagggcacgatgggcgcggaggcg
attgagaagctcatcgaggccttcgacatcgcggccgaggcggagaacctccgcgagacc
atccgctccggcaaggggcagaagaagctgcgcgcgctcaagcggctcaaggtcgtcgcc
gcgttccagagttcgggcaacgacccggccggcatggtcctcaacgccgtgccggtgatc
ccgccggagctgcgtccgatggtgcagctggacggcggccggttcgccaccagcgacctc
aacgacctgtaccggcgcgtgatcaaccggaacaaccgcctcaagaggctgatcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggagtcggtggacgcg
ctgttcgacaacggccgccgcggtcgcccggtcacgggaccgggcaaccggccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccgcttccgccagaacctgctgggcaag
cgcgtcgactactcgggccgctccgtgatcgtcgtcggcccccagctcaagctgcaccag
tgcggcctgccgaagctgatggccctcgagctgttcaagccgttcgtgatgaagcggctc
gtggacctcaaccacgcgcagaacatcaagtcggccaagcggatggtggagcgtcagcgc
ccgcaggtgtgggacgtgctcgaagaggtcatcaacgagcacccggtgatgctcaaccgt
gcgcccacgctgcaccgcctgggcattcaggcgttcgagccgcagctggtcgagggcaag
gccatccagctgcacccgctggtgtgcgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacgtgccgctgtcgtcggaggcgcaggccgaggcccgcatcctgatgctg
tcgagcaacaacatcctgtcgccggcgtccggccgcccccttgcgatgccgcgtctggac
atggtgaccggcctgtaccacctgacccgcgaggtcgaggacgccgacggctcgtacacg
ccgtcggcgacggaccaggcggcgacgggcgtctactcgacgcccgccgaggcgatcatg
gccgtcgacctgggcgagctgacgatgcaggcgcgcatccgcgtgcgcctggaccggcag
cgtcccccggccgagatcgaggccgagcgattcccggacggctggaagccgggtgactcg
tggctggccgagaccacgctgggccgcatcctgttcaacgagctgctcccggtggactac
ccgttcatcgacgaagtgatgccgaagaagcggcaggccgcgatcatcaacgatctggcc
gagcgctacccgatgatcaccgtcgcccagacggtggacaagctcaaggacaccggcttc
tactgggcgacccgttcgggcgtcaccgtggccatgtccgacgtgctggtgccgccgcag
aagaccgagatcctggaagcgtacgagaagcgcgccgatcagaccgagaagctgtaccag
cgcggcgcggtcggcgagtcggagcgcaacagcgagctggtcaagatctggtccgaggcc
accgaagaggtcgccaaggccatggaggccaactacccggacgacaacccgatcccgatg
atcgtgaagtccggcgcagcgggcaacatgacccaggtccgttcgctgtccggcatgaag
ggcctggtgaccaacccgaagggcgagttcatcccgcggcccatcaagtcctcgttccgc
gagggcctgaccgtgctcgagtacttcatcaacacgcacggcgcccgcaagggcctggcg
gacacggcgctgcgcacggccgactcgggctacctgacccgccgcctggtcgacgtctcg
caggacgtcatcgtgcgtgaggtcgactgcgcgacgccgcgcggcatcacgatcgccatc
gcggagaccgagctcgacgcggcgggggagcccacgggcaacctggtccgcgacgcgcac
gtggagaccgccgcgttcgcccgcaccctcgcatccgatgcgctggacgcggacggcaac
gtggtcgtggcgaaggacagcgacctgggcgatccggcgatcgagaagctgctcgccgcc
ggcgtcacaaaggtgaaggtccgctcggtcctgacctgtgccaccggcacgggcgtgtgc
gccaagtgctacgggcgttcgatggccaccggccagctggtggacatcggcgaggccgtg
ggcatcgtcgcggcgcagtcgatcggcgagccgggcacgcagctcaccatgcgcaccttc
caccagggtggtgcgggcggtgacgacatcaccggcggcctgccgcgtgtgcaggaactg
ttcgaggcgcgcgtgcccaagggcaaggcgcccatctccgagcagtcgggccgggtgcgc
atcgaggacgacgaccgcttctacaccatcaccgtcacgcccgacgacggcggcgaagag
gtcgtctacgacaagctgtccaagcggcagcgcctcgccaagcaccgtcccgagggcgag
cagtacgagcgcgtcctgcaggacggcgaccacgtggaggtgggccagcagcttctcgaa
ggtgctgcggacccgcacgaggtcctgcgcatcatgggcccccgcgacgtccaggtgcac
ctggtcaacgaggtgcaggaggtctaccgggcccagggcgtgtcgatccacgacaagcac
atcgaggtcatcgtgcggcagatgctccgccgcgtgacgatcatcgattccggtgccacg
gagttcctgcccggatcgctggtcgagcgcgccgacttcgacgcgaccaacaagcgggcc
gtccaggagggtcaggagccgtccgccggccgtccggtgctcatgggcatcacgaaggcg
tcgctggccaccgactcgtggttgtcggcggcgtccttccaggagaccacgcgcgtgctg
accgacgcggcgatcaaccgtcgcagcgacagcctggtgggcctgaaggagaacgtgatc
atcggcaagctgatcccggccggaaccggcatcaaccggtaccggaacatccaggtgcag
ccgacggaggaggcgcgcgccgccgcttacgcggtgcccgcctacgacgacgcgttctac
ggacccgacggcggcttcggcagcgccaccggtgccgcggtgccgctggacgacttcccg
ttctccggcgactaccgctag
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