Tomitella fengzijianii: FO059_08040
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Entry
FO059_08040 CDS
T06118
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
toy
Tomitella fengzijianii
Pathway
toy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FO059_08040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
toy03021
]
FO059_08040
03019 Messenger RNA biogenesis [BR:
toy03019
]
FO059_08040
Transcription machinery [BR:
toy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FO059_08040
Messenger RNA biogenesis [BR:
toy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FO059_08040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
CoV_NSP2_C
Motif
Other DBs
NCBI-ProteinID:
QDQ99163
UniProt:
A0A516X809
LinkDB
All DBs
Position
1772292..1774337
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AA seq
681 aa
AA seq
DB search
MRSTARPGCDPRPGKERTSVTDTELINTAGAAQGDSRARGRDKSAVSSMLLPELKALAVQ
LGIKGTSGMRKGQLLAAIQEHQAGGGNAKTTAPAGRRKAAAPAAAATETRGGEASAIVAP
ANNRPGETAPAGSGAADGGDRQKPESAAPEASARGERQGDRPDVTGGDKSARGRGGESGG
RGEGNGRSGDDDGNRRDRGGQSRRGGRDNRGGDNRGGDNRGGDNRGGDKKGNDNRGGDKN
SENQGGNSGNQGGNSGNQGGGRNRGQGDGDGGGRRGRRFRERRRGRDRGDRGGDVEVRDD
DVLQPVAGIIDVLDNYAFVRTSGYLPGSNDVYVSMNMVRKNGLRRGDAITGAVRVPRDND
HQNQRQKFNPLVRLDTVNGSDVETAKARPEFSKLTPLYPNQRLRLETEPNQLTTRVIDLI
MPIGKGQRALIVSPPKAGKTTVLQSIANAIATNNPECYLMVVLVDERPEEVTDMQRSVRG
EVIASTFDRPPSDHTAVAELAIERAKRLVESGKDVVVLLDSITRLGRAYNNSSPASGRIL
SGGVDSTALYPPKRFLGAARNIEHGGSLTIIATAMVETGSQGDTVIFEEFKGTGNAELKL
DRKIAERRVFPAVDINPSGTRRDDLLLAPEEAAVVHKLRRVMSGLDSQQAIDVLMEQLKK
SRTNYEFLMQVSKTALGAAPE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcaacggccaggcccggatgcgatccgcgtccgggtaaagaaaggacctccgtg
accgatacggaactcatcaacaccgcaggcgccgcgcaaggcgattcccgtgcgcgtggc
cgcgacaagtccgcggtgtcgtccatgcttcttccggagttgaaggcgctggccgtccag
ctggggatcaagggcacgtcgggtatgcgcaaggggcagctgctcgcggcgatccaggaa
caccaggccggaggcgggaacgccaagaccaccgcaccggccggccgacgcaaggcggcg
gcacccgcagccgctgccaccgagactcgaggcggggaggcgtcggcgatcgtggccccg
gcgaacaaccggcccggggagacggctccggccggcagtggcgcggcagacggcggcgat
cggcagaagccggaatcggcggcgcccgaggcgtcggcgcgtggcgaaaggcagggggat
cggcccgacgtcaccggtggcgacaagtctgcacgcggccgcggcggcgagtccggcggt
cgtggcgagggaaacggccgcagcggcgacgacgacggcaatcgccgggaccgcggcggg
caatcgcgtcgcggcggtcgtgacaaccgcggcggcgacaaccgcggcggcgacaaccgc
ggcggcgacaaccgcggcggcgacaagaagggcaacgacaaccgcggcggcgacaagaac
tccgagaaccagggcgggaactccggcaaccagggcgggaactccggtaaccaaggcggg
ggtcgtaaccgtggccagggtgacggcgacggtggcggccgtcgtggtcgccggttccgt
gagcgcaggcgcgggcgcgaccgcggtgaccgcggcggtgatgtcgaggtgcgcgatgac
gatgtgctgcagcccgtggccggcatcatcgacgtactggacaactacgcattcgtgcgc
acgtcgggttacctcccggggtccaacgacgtgtacgtgtcgatgaacatggtgcgtaag
aacgggctgcgccgcggcgacgccatcaccggtgccgtccgcgtcccgcgcgacaacgat
caccagaatcagcgccagaagttcaatccgctggtgcggctggacacggtcaacggttcc
gacgtcgagacggcgaaggcgcgtccggagttctccaagctcacgccgctgtaccccaat
caacggctgcgtctggagaccgaaccgaaccagctgacgacccgggtcatcgacctgatc
atgccgatcggcaaggggcagcgcgccctgatcgtcagcccgccgaaggccggcaagacg
acagtccttcagagcatcgccaacgcgatcgcgacgaacaaccccgagtgctatctgatg
gtggtgctcgtcgacgaacggccagaggaagtcaccgacatgcagcggtcggtgcgcggc
gaggtcatcgcctcgaccttcgaccggccgccttcggatcacacggccgtggcggagctc
gccatcgaacgggcgaagcgcctggtcgaatccggtaaagacgtcgtggtgctgctggac
tcgatcacgcggctcggacgtgcctacaacaactcgtcgcccgcatcgggccgcatcctg
tccggcggcgtcgattcgacggcgctgtacccgcccaagcggttcctcggcgcggcgcgc
aacatcgagcacggcgggtcgctgacgatcatcgccacggcgatggtcgagaccgggtcg
cagggtgacacggtgatcttcgaggagttcaagggcaccggcaacgccgaactcaaactg
gaccggaagatcgcggagcgacgcgtgttccccgccgtcgacatcaacccctcgggcact
cgcagggacgaccttctcctggctccagaggaggccgcggtggtgcacaagctgcgccgc
gtgatgtccgggctcgattcgcagcaggccatcgacgtcctgatggaacagctgaagaag
agcaggacgaactacgagttcctcatgcaggtctcgaagaccgcactcggggccgccccc
gagtga
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integrated database retrieval system
