KEGG   Tomitella fengzijianii: FO059_10875
Entry
FO059_10875       CDS       T06118                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
toy  Tomitella fengzijianii
Brite
KEGG Orthology (KO) [BR:toy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:toy03032]
    FO059_10875
   03036 Chromosome and associated proteins [BR:toy03036]
    FO059_10875
   03400 DNA repair and recombination proteins [BR:toy03400]
    FO059_10875
DNA replication proteins [BR:toy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FO059_10875
Chromosome and associated proteins [BR:toy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FO059_10875
DNA repair and recombination proteins [BR:toy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FO059_10875
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HC2
Other DBs
NCBI-ProteinID: QDQ97733
UniProt: A0A516X414
LinkDB
Position
complement(2391177..2392166)
AA seq 329 aa
MNKAELIDGLVEKLGTERRTTTAVVEGFVDAVVRAVHAGENVTITGFGVFEKRARAPRVA
RNPRTGETVRVRATRVPAFRPGAQFKELVSGKQKLSTSGVAVKRGSGAPTLPAASAPAAK
KATPAKKTAAKSTAAKKSTPAKKTAAAKAAPAKKTAAKTTAANKTAAAKAAPAKKTAAKS
TAAKKTAAAKATATKATAAAKKSTPAKKTSAAKKTTAAKKTTAAKKTAATKATAAKKTTA
AKKTTAAKKSTPAKKTTAAKKSTPAKKTSAAKKTTAAKKTTAAKKATAAKKTTAAKKTTA
AKKATPAKKTTAAKKTTARKSPARKSPAK
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaacaaggcagaactcatcgatggtctggtcgagaagctgggcaccgagcgccgcacg
acgacggcggtggtcgagggattcgtcgacgccgtggtccgtgcggtgcacgccggcgag
aacgtgaccatcaccggattcggcgtcttcgagaagcgcgcccgggcaccgcgtgtggcc
cggaatccgaggacgggcgagacggtgcgggtgcgcgctacacgggttcccgcgttccgc
ccgggagcgcagttcaaggaactcgtctccggcaaacagaaactcagtacctccggcgtc
gccgtcaaacgaggctccggcgctcccacgctgcccgcggcgtctgctcccgcagcgaag
aaggcgacgccggcgaagaagacggccgccaagtcgacagccgcgaagaagtccacgccg
gcgaagaagactgcggctgcgaaggcggcgccggcgaagaagaccgccgcgaagacgacc
gccgcgaacaagaccgcggctgcgaaggcggcgccggcgaagaagaccgccgccaagtcg
accgccgcgaagaagactgcggctgcgaaggcgacggctacgaaggcgacggccgccgcg
aagaagtccacgccggcgaagaagacgtcggctgccaagaagacgacggcggcgaagaag
acgacggccgcgaagaagaccgcggctacgaaggcgacggctgccaagaagacgacggcg
gcgaagaagacgacggcggcgaagaagtccacgccggcgaagaagacgacggcggcgaag
aagtccacgccggcgaagaagacgtcggctgcgaagaagaccactgccgcaaagaagacg
accgccgcaaagaaggcgacggccgcaaagaagaccaccgccgcgaagaagaccaccgcg
gcgaaaaaggccacgccggcgaagaagacgacggctgcgaagaagacgacggcgcgcaag
tcgcccgcgagaaagtcgcccgcgaagtaa

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