Tomitella fengzijianii: FO059_11695
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Entry
FO059_11695 CDS
T06118
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
toy
Tomitella fengzijianii
Pathway
toy03030
DNA replication
toy03430
Mismatch repair
toy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
toy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FO059_11695 (dnaE)
03430 Mismatch repair
FO059_11695 (dnaE)
03440 Homologous recombination
FO059_11695 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
toy03032
]
FO059_11695 (dnaE)
03400 DNA repair and recombination proteins [BR:
toy03400
]
FO059_11695 (dnaE)
Enzymes [BR:
toy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FO059_11695 (dnaE)
DNA replication proteins [BR:
toy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FO059_11695 (dnaE)
DNA repair and recombination proteins [BR:
toy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FO059_11695 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
SPDY
Motif
Other DBs
NCBI-ProteinID:
QDQ99294
UniProt:
A0A516X8A1
LinkDB
All DBs
Position
complement(2580172..2583669)
Genome browser
AA seq
1165 aa
AA seq
DB search
MLDGAAKTDALFAEAHRLGMTAVGMTDHGNMFGASDFYNQAVKADIKPIIGIEAYVAPES
RFNTKRVKWGDPSQKSDDVSGSGAYTHMTMVARNATGLRNLFKLSSLASIEGQLGKWSRM
DADIIAEHAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQEIFGEENFFMEVMDHGL
SIERRVRSGLMDISRQLGIPPLATNDCHYVKQDFSQTHEALLCLQTGKTLNDPTRFKFDG
DGYFLKPASDMRALFDDEVPGACDNTLLVAERVESYEQVWAHHDRMPIFPVPEGHTQGSW
LREEVASGLRGRFPSGPSQAYLDRADYEIGVIEQMGFPAYFLVVGDLVRHAHEVGIRVGP
GRGSAAGSLVAFALGITNIDPLPHGLLFERFLNPERVSMPDIDMDFDDRRRGEMVRYASD
RWGEDKVAQVITFGTIKTKAAIKDSARVHFGQPGFQIADRISKALPPPVMAKDISVAGIT
DPEHERYAEAAEVRALVETDPDVRTIYDTALGLEGLIRNAGVHACAVIMSSEPLMDAIPL
WKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVLGDALDNLKANRDVELDLDTLPLD
DAKTYELLARGETLGVFQLDGVAMRDLLRRMQPTGFEDIVAVLALYRPGPMGMNAHNDYA
DRKNGRQQVTPIHPELEEPLKEILADTYGLIVYQEQIMQIAQKVAGYSLGRADILRRAMG
KKKASVLEAEFEGFEKGMQDNGYSKQAIKALWDTILPFAGYAFNKSHAAGYGLVSYWTAY
FKANYPAEYMAGLLTSVGDDKDKAAVYLADCRHLGITVLPPDVNESGTYFASVGEDIRFG
LSAVRNVGTNVVASIIAAREEKGAFTGFSDYLGKVDAAACGKKAIESLIKAGGFDSLGHP
RKGLLLVHADAVDSVMGTKKAEAIGQFDLFGGAGAAEENSSVFDIPVPDEEWETKHRLAL
EREMLGLYVTGHPLNGVEHVLAAQSDTSIPAILEGKVKDGTQVSVGGILSSVNRRVNKQG
LPWASAQLEDLTGGIEVLFFPKTYSVLGMDVADDAIVLLKGRISERDERRSLIVNDLAVP
DLSSVGVARPLAVTMATRMCTPDKVETLRQVLTRHPGTSDVHLRLVSGDGGKVRLFRLDE
RLRVDPTSALMGDLKALLGASCLGA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggcgccgccaagaccgacgctctgttcgcggaagcgcaccggctcggcatg
acggccgtcggcatgaccgaccacggcaacatgttcggcgccagcgacttctacaaccag
gccgtcaaggcggacatcaagccgatcatcggcatcgaggcctatgtggcgccggagtcc
cgcttcaacaccaagcgcgtcaagtggggcgacccgtcccagaagtccgacgacgtctcc
ggcagcggcgcctacacgcacatgacgatggtcgcccgcaacgcgacgggcctgcgcaac
ctgttcaagctgtcctcgctggcctcgatcgaggggcagctgggcaagtggtcccgcatg
gacgccgacatcatcgccgagcacgcagagggcatcatcgccaccaccggctgcccgtcg
ggcgaggtgcagacccgcctgcgcctggggcacgagcgtgaggcgctcgaggccgcggcg
aagtggcaggagatcttcggcgaagagaacttcttcatggaggtcatggaccacggactg
tcgatcgagcgccgcgtgcgctcggggctgatggacatctcccggcagctcggcatcccg
ccgctggccaccaacgactgccactacgtcaaacaggacttctcgcagacgcacgaggcg
ctgctgtgcctgcagacgggcaagacgctcaacgatccgacgcggttcaagttcgacggc
gacggctacttcctcaagcccgcctccgacatgcgggcgctgttcgacgacgaggtcccc
ggcgcctgcgacaacaccctgctggtggccgagcgcgtggagtcctacgagcaggtgtgg
gcccaccacgaccggatgccgatcttcccggtgcccgaggggcacacgcagggttcgtgg
ctgcgcgaggaggtcgcctccgggctgcgcggccgcttcccgtccgggccctcgcaggcc
tacctggaccgcgccgattacgagatcggcgtgatcgagcagatggggttccccgcctac
ttcctcgtggtcggggacctggtgcggcacgcgcacgaggtgggcatccgcgtggggccg
ggccgcgggtccgccgccgggtcgctggtcgccttcgcgctgggcatcaccaacatcgac
ccgctgccgcacggcctgctgttcgagcgcttcctcaacccggagcgcgtgtcgatgccc
gatatcgacatggacttcgacgaccgccgccgcggcgagatggtccgctacgcctccgat
cgctggggcgaggacaaggtggcccaggtcatcaccttcggcaccatcaagaccaaggca
gccatcaaggattcggcccgcgtgcacttcggccagccgggtttccagatcgccgacagg
atctccaaggcgctgccgccgccggtcatggccaaggacatctccgtcgccggcatcacc
gacccggagcacgagcggtacgcggaggccgccgaggtgcgcgcactcgtcgagacggac
cccgacgtgcgcaccatctacgacaccgcactgggactcgagggcctgatccgcaacgcg
ggcgtgcacgcctgcgcggtgatcatgtcctcggaaccgctcatggacgcgatcccgctg
tggaagcgcgcgcaggacggcgcgatcatcacgggctgggactatccgtcgtgcgaggcg
atcggcctgctcaagatggacttcctggggctgcgcaacctcacggtgctcggcgacgcg
ctggacaacctcaaggccaaccgcgacgtcgagctggacctggacaccctgccgctggac
gacgccaagacctatgagctgctggcgcgcggcgagacgctgggcgttttccagctcgac
ggcgtggcgatgcgcgacctgctgcgccgtatgcagccgaccgggttcgaggacatcgtg
gcggtgctggcgctgtaccgccccgggccgatgggcatgaacgcccacaacgactacgcc
gaccgtaagaacgggcgccagcaggtcacgcccatccaccccgagctcgaggaaccgctc
aaggagatcctggcagacacctacgggttgatcgtctaccaggagcagatcatgcagatc
gcgcagaaggtggccgggtactcgctgggccgagcggacatcctgcgccgtgccatgggc
aagaagaaggcgtccgtgctcgaggccgagttcgagggcttcgagaagggcatgcaggac
aacggctactcgaagcaggccatcaaggcgctgtgggacacgatcctgccgttcgccggg
tacgcgttcaacaagtcgcacgccgccggctacgggctcgtgtcgtactggaccgcctac
ttcaaggccaactaccccgccgagtacatggcgggtctgctcacctcggtgggcgacgac
aaggacaaggcggccgtgtatctggcggactgccgccacctgggcatcacggtgctgccg
ccggacgtcaacgagtccgggacctacttcgcctccgtcggcgaggacatccgcttcggc
ctctcggcggtgcgcaacgtcggcaccaacgtggtggcctcgatcatcgcggcgcgcgag
gagaagggcgcgttcaccgggttctcggactatctgggcaaggtggacgcggcggcgtgc
ggcaagaaggccatcgagtcgttgatcaaggcgggcggattcgattccctggggcatccg
cgcaaggggctgctgctcgtgcacgccgacgcggtcgactccgtcatgggcaccaagaag
gccgaggcgatcggccagttcgacctgttcggcggggcgggggccgcggaggagaactcg
tcggtgttcgacatccccgtacccgacgaggagtgggagaccaagcaccggctggcgctc
gagcgcgagatgctcgggctgtacgtcaccggccatccgctcaacggcgtggagcatgtc
ctggcggcccagtcggacacgtcgatccccgcgatcctcgagggcaaggtcaaggacggc
acccaggtgtcggtgggcggcatcctctcgtcggtgaaccggcgggtgaacaagcagggc
ctgccgtgggcgtcggcacagctcgaggacctcaccggcggcatcgaggtgctgttcttc
cccaagacctactcggtgctgggcatggacgtcgccgacgacgcgatcgtcctgctcaag
gggcgcatctccgagcgcgacgagcgacggtcgctcatcgtcaacgacctggcggtgccg
gacctgtcctcggtgggcgtggcgcggccgctggcggtcacgatggcgacgcgcatgtgc
acgcccgacaaggtcgagacgctgcgtcaggtgctcacccggcaccccggcacctcggac
gtgcacctgcggctggtcagcggcgacggcggcaaggtgcgcctgttccgcctggacgag
cggttgcgagtcgatcccacctcggcgctgatgggggacctcaaggcgctgctcggcgcg
agctgcctgggcgcctga
DBGET
integrated database retrieval system
