Tomitella fengzijianii: FO059_13690
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Entry
FO059_13690 CDS
T06118
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
toy
Tomitella fengzijianii
Pathway
toy03420
Nucleotide excision repair
toy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
toy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FO059_13690
03430 Mismatch repair
FO059_13690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toy03400
]
FO059_13690
Enzymes [BR:
toy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FO059_13690
DNA repair and recombination proteins [BR:
toy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FO059_13690
MMR (mismatch excision repair)
Other MMR factors
FO059_13690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
NYN
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDQ98169
UniProt:
A0A516X522
LinkDB
All DBs
Position
complement(2996437..2999874)
Genome browser
AA seq
1145 aa
AA seq
DB search
MTASHAARVGAAEIADALGQFPPTAEQTAVIEAPLEPVLVVAGAGAGKTETMAARVVWLV
ANGLVEPSQVLGLTFTRKAAGQLTDRIRRRLARLAGSSLLRDVDPGGGIRDRLRSAEPEV
STYHSYAGRLLGEYGLLLPMEPSVRMLGETELWQIAHRVVSTWDGDIDTDSSPATITEQV
LKLANQLGEHLVDPADLDRSHVELEHLVFTLPPGPRQRAEPSQKLTGPLAVQERRVALLP
LVRRLAEELRAQGALDPGSQMSLAARLASAHAEVGEAERARFRAAMLDEYQDTGHSQRVL
LSSLFGGGHADPDRDDGDARGAAAVALTSVGDPMQSIYGWRGASAANLPYFTTDFPTGRR
PARILELLTSWRNPAEALTLANAVAAPLRERGVPVSELRPRPDVPPGDLRAALLPDVDAE
REWLAGHIATRFDVARAAGDPPPTTAVLVRRNADSVPIAEALRERGVPVEVVGVGGLLQQ
PEVRDVVDTLRLVADPLAGTAAMRVLTGPRVRLGAADLGALARRVRELGRHGRPGTQGLL
SDEDELHDALAAALPGDEGDEAGLGDAIADPGPAERYSREGHRRITALARRLASLRRRIG
QPLTELTAEVERSLDIGIEVAARSGNTGGGREQLDAFAMVVAEYAADPHATLTGLLGYLS
AAESVEKGLTPGEVELDPHRVQILTVHASKGLEWQVVAVPHLVGGVFPADRGTSTWMGDV
TELPPQLRGDRAAEDGGEGVPVPDLDGCTTRKDLENALDAHKKALARRRLEEERRLFYVA
VTRTEHTLLLSGHHWPASGKAKGPSVFLTEARDILESGAGRVEQWAPEPDDTENPLAAHP
RTSQWPVDPLAGRRDDVEEGARMVLDELDAAEYAAEEDRADAPRDDPDDGSGAVAGGESA
PEDPEGWAADVELLLAERAAAADRALEVPLPARLSVSQMVQLRADPDVLAERLRRPVPYK
PNPLARRGTAFHAWVERRFGATRLLDLDELPGAADTGAEPGADLQALQESFLASPWASRS
PVEVEVPFETVIGGVLLRGRIDAVFRDDDGGWTVIDWKTGAPPTPAEEPAVAIQLAVYRV
AWAELMASGGTGTGDGAVAAAPPLERVRAAFHYVRSGRTAAPPDLPDADELAALLEAAPE
SSGGR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctcgcacgccgcgcgggtcggcgcggccgagatcgccgatgcactcggccag
ttcccgcccaccgctgagcagacggcggtgatcgaggcgcccctcgagcccgtcctcgtc
gtcgccggcgcgggcgcgggcaagaccgagacgatggcggcgcgggtggtgtggttggtg
gccaacggcctcgtcgagccgtcgcaggtcctcggcctcaccttcacacgcaaggccgcc
ggccagttgacggaccgcatccgccgcagactggcgcggctggccggatcgtcgcttctg
cgggacgtcgaccccggcggcggcatccgggacaggctccgttccgcggaacccgaggtg
agcacctaccactcctacgccgggcgcctgctgggcgagtacggcctgctgctgccgatg
gaaccgtcggtgcggatgctcggggagaccgaactctggcagatcgcccatcgggtcgtc
agcacctgggacggcgacatcgacaccgactccagcccggccacgatcaccgagcaggtc
ctcaaactggccaatcagctgggcgaacacctcgtggatccggcggacctcgaccggtcg
cacgtggaactcgagcatctcgtgttcacgctcccgcccggcccgcggcagcgcgcggag
ccgtctcagaagctcaccgggccgctcgccgtgcaggagcgccgagtcgcgttgctgccg
ctggtgcgcaggctggccgaggagctccgtgctcagggcgccctggacccgggctcgcag
atgtccctggcggccaggctcgcctccgcgcacgcggaggtgggcgaggcggaacgcgcg
cggttccgggcggcgatgctcgacgagtatcaggacaccgggcactcgcagcgcgtgctg
ttgtcttcgttgttcggcggcggacacgcggacccggatcgcgatgacggcgacgcccgc
ggtgcggcggccgtagcgctgacctccgtcggtgacccgatgcagtcgatctacgggtgg
cggggcgcctcggcagccaatctgccgtacttcaccaccgatttcccgacgggccggcgc
ccggcacggatcctcgaactgctcaccagttggcgcaacccggccgaggcgctcaccctg
gccaacgcggtcgccgcgccgcttcgggagcggggagtgccggtgagcgagctgcgtcca
cgcccggacgtcccgccgggcgatctgcgggcggcactgctgccggacgtggacgccgag
cgcgagtggctggccggacacatcgcaacgcgcttcgatgtcgcgcgcgccgccggcgat
ccaccgccgaccacggcggtgctcgtgcgccgcaacgcggactccgttccgatcgccgag
gccctgcgcgagcgcggcgtgcccgtggaggtggtgggcgtcggggggctgctgcagcag
ccggaggtccgcgacgtggtcgacacgctccgcctcgtggcagacccgctcgccggcacc
gctgccatgcgcgtgctgaccgggccgcgcgtcaggctcggcgcggccgacctgggcgcg
ctggcgcggcgggtgcgcgagctgggcaggcacggccggcccggcacccaggggctgctc
agcgacgaggacgagctgcatgacgcgctggccgcggcccttcccggcgacgagggcgat
gaggccggcctcggcgatgccatcgcggacccgggccccgccgagcggtattcgcgggaa
gggcaccgccggatcacggcactggcgcggcgcctggcgtccctgcgccggcgcatcgga
cagccgctcacggagctgaccgcggaggtcgagcggtccctggacatcggcatcgaggtg
gcggcgcgcagcggaaacaccggcggcgggcgcgagcagctcgacgcgttcgcgatggtc
gtggccgagtacgcggccgacccgcacgccacgctcaccgggctgcttgggtacctctcc
gccgcggaatccgtggagaaggggctcacgccgggcgaggtcgaactggacccgcaccgc
gtgcagatcctcaccgtgcacgcctcgaagggcctcgaatggcaggtcgtggcggttccg
cacctggtcggcggggtctttcctgcggacaggggcacgtccacatggatgggggacgtc
acggaactgccgccgcagctgcgcggcgaccgggcggccgaggacgggggtgagggtgtg
ccggtgcccgacctcgacgggtgcaccacccgcaaggacctcgagaatgcgctcgatgcg
cacaagaaggcgctggcgcggcgccggttggaggaggagcgccggctgttctacgtcgcg
gtcacgcggacggagcacacgctgctgctctccggccaccattggccggcctccggcaag
gcgaaagggccgtcggtcttcctcaccgaggcgcgggacatcctcgaatccggcgccggg
cgcgtcgagcagtgggcgcccgaaccggacgacaccgagaatcccctcgccgcacacccc
cggacgtcgcagtggccggtcgaccccctcgcagggcggcgcgacgacgtcgaagagggc
gcgcggatggtgctcgacgagctggacgccgcggagtacgcggcggaggaggaccgtgcg
gacgcgccgcgggacgatcccgatgacgggagcggcgctgtcgcgggcggggagagcgcg
ccggaggatccggagggctgggcggccgacgtcgagctgctgctggccgagcgcgcggcc
gcagccgaccgggcgctcgaggtgcccttgcccgcgcggctttccgtcagccagatggtg
cagctgcgcgcggaccccgacgtgctggcggaacgcctccgtcggcccgtcccctacaag
ccgaatccgctcgcgcgccgcggcaccgcgttccacgcgtgggtcgagcggcggttcggg
gccactcggctgctcgacctcgacgaactgcccggcgcggcggacacgggcgccgagccc
ggggcggacctgcaggccctgcaggagtcgttcctcgcgtcgccctgggcgtcgcgcagc
cctgtcgaggtggaggtgccgttcgagaccgtcatcggcggtgtcctgctgcgcgggcgc
atcgacgcggtcttccgggacgacgacggcgggtggacggttatcgactggaagaccggc
gctccgcccacccccgcggaggagccggccgtcgccatccaactcgccgtgtaccgcgtg
gcctgggccgagctgatggcgtcgggcggaaccggcaccggcgacggtgcagtggccgcc
gcgcctccgcttgaacgggtccgggcggcgttccactacgtgcgcagcggtcgcaccgcc
gcgcccccggatctgccggacgccgacgagctggccgcgctgctggaagcggcccccgag
tcctcgggagggaggtga
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