Tolypothrix sp. PCC 7712: HGR01_15385
Help
Entry
HGR01_15385 CDS
T11261
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
toz Tolypothrix sp. PCC 7712
Brite
KEGG Orthology (KO) [BR:
toz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
toz03032
]
HGR01_15385 (topA)
03400 DNA repair and recombination proteins [BR:
toz03400
]
HGR01_15385 (topA)
Enzymes [BR:
toz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HGR01_15385 (topA)
DNA replication proteins [BR:
toz03032
]
Prokaryotic type
DNA Topoisomerases
HGR01_15385 (topA)
DNA repair and recombination proteins [BR:
toz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGR01_15385 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
TPD52
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UYD29296
LinkDB
All DBs
Position
complement(3834655..3836838)
Genome browser
AA seq
727 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGSEWIVRASCGHIRELSNEGEDSLGFTMEGSHVQCRYVP
RDQQAKETIQQLKAAVKQVQEVVLATDPDREGETIAWHLKEALGLRQPKRVVYTEITEAA
VRTAIAHPRELDTNLVGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREIQTFVPQDYWSVWVDYAEGFRAFYKGMVNAPKEAAKEEGEVNDDAAVNSTQAPEST
RVLSEAEANRLVEEARRHPHKVVQFEGKIVNRQPPPPFITSTLQQAAGSRLRFAPEKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCDSARKWLEQNDPQNVPQKTTKHRSNKTAQEAHEA
IRPTDVFRPSVQLRLELTEDEFNLYVLIWKRAIASQCRAAQLRKTLVITQSGDILWQARG
QVVEFLGYARYWPNLSKDSILPNLQQGQMLTLENAGHEKKQTQPPPRYSEPKLVQLMERK
GIGRPSTYSPTIATLKKRGYVQLAKDSLQPTTLGLEVDAFLQKALPDLLETEFTAKMEDA
LDAIASGKQQWQQYLTKWNENYFAPALAKAKTIVVTAATGVKNYPVTERKFETSRTRCPQ
CKNHLAKIPSSKVKKKYFLKCVSGCENIVLFWSEYSKSWEAPRSQAAKETKETKEISPQK
PKAAITKYSCPVCHKPLEEYSYVKDGQNKKMLRCSNPQSRNDKKHKDIAYFSTQKGWWSP
KLGELKG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgccttctggtggttgaatctccgggtaaagtgaaaaagctcagtcaaatt
ctgggttctgagtggattgtacgcgctagttgcggtcacattcgcgaactgagtaatgag
ggtgaggattctctgggttttacgatggaagggagtcatgtgcagtgtcgctatgtcccc
cgggatcaacaggctaaggaaacgattcagcagttaaaggcggcggtaaagcaagtacag
gaagttgttttagctacagatccagatagagaaggggaaaccattgcttggcatctcaag
gaagctttgggactgaggcaaccaaaacgggtggtgtacactgaaattacagaagcagca
gtcagaactgcgatcgcacatcctagagaattagatacaaatttggtaggggcgggattg
tgccgcgattgtttagataagctggtaggttacaagggtagtcctttagtttgggcgttg
aataatggggcgaaaagtgtcgggagagtccaaagtgctaccttacacttaatttgtcag
cgcgagagagaaattcaaacttttgtaccgcaagattattggagtgtgtgggtagattac
gctgaaggcttccgcgctttttacaaagggatggtgaatgcgcccaaggaagcagcgaag
gaagaaggggaagtgaatgacgatgcggcggtgaatagcacccaagcaccagaatctacc
cgtgtgctgtcggaagcggaagcaaatcgcctagtagaagaggcgcgccgccatccgcac
aaagtggtgcaatttgaaggcaaaattgttaaccgccaaccaccaccaccatttatcacc
tctactttacagcaagctgccggttctcggttgcgctttgccccagagaagacaatgcag
gtagcacaaaagctctatgaagctgggctaattacttatatgcgaacagattcagtgatg
ctcagtccggagttctgtgatagcgcccgtaagtggttggagcaaaacgatccgcaaaat
gtcccccaaaaaactaccaaacatcgcagtaataaaactgctcaggaagcccatgaagcg
attcgcccgacagatgtgtttcgcccttctgtgcagttacgcctagaactaaccgaagat
gagtttaacttgtatgtcttaatttggaaaagagcgatcgcatctcaatgtcgagccgca
caactgcgaaaaactctagtaattacccaatctggggatattctctggcaagcaagaggg
caagttgtggaatttttaggctatgcgcgctactggcctaacctgagtaaagatagtatt
ttgcctaatttacaacaagggcaaatgctgactttagaaaatgctggacatgagaagaaa
caaacccaaccgccaccgcgttacagcgaacccaaattagtgcaattaatggagcgtaaa
ggcattggtcgtcctagtacctattctcccacaatcgccacactgaaaaaacgcggttat
gtgcagttagcgaaagatagtttacagccaaccaccttggggttagaagtcgatgccttt
ttgcagaaagccttacccgacttattagaaaccgaatttaccgccaaaatggaagatgcc
ctagatgcgatcgcatctggtaaacaacagtggcagcaatatctcaccaaatggaacgag
aattattttgcaccagctttagccaaagccaaaaccatcgtcgtgactgcggcgactggc
gtgaaaaattatcctgtcaccgaacgcaaatttgaaacttcccgcactcgttgcccacag
tgcaagaatcatttagccaaaattcccagtagtaaagttaaaaagaaatatttcctcaaa
tgcgtcagtgggtgtgagaatatcgtgctgttttggagcgaatatagcaaaagttgggaa
gcaccccgttctcaagctgcgaaggaaacgaaggaaaccaaagaaatcagcccccaaaaa
cccaaggctgcaattaccaaatactcctgtccagtatgtcacaagcccttagaagagtac
agttatgtcaaagatggacagaacaagaaaatgctacgctgttccaacccccaatcccgc
aacgataaaaaacacaaagatatcgcctacttcagcacccagaaaggttggtggagtccg
aagttaggagagttgaagggatga
DBGET
integrated database retrieval system
