Tolypothrix sp. PCC 7712: HGR01_16070
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Entry
HGR01_16070 CDS
T11261
Name
(GenBank) trans-splicing intein-formed DNA polymerase III subunit alpha N-terminal partner DnaE-N
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
toz Tolypothrix sp. PCC 7712
Pathway
toz03030
DNA replication
toz03430
Mismatch repair
toz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
toz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HGR01_16070
03430 Mismatch repair
HGR01_16070
03440 Homologous recombination
HGR01_16070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
toz03032
]
HGR01_16070
03400 DNA repair and recombination proteins [BR:
toz03400
]
HGR01_16070
Enzymes [BR:
toz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HGR01_16070
DNA replication proteins [BR:
toz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HGR01_16070
DNA repair and recombination proteins [BR:
toz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HGR01_16070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Endotoxin_C2
Motif
Other DBs
NCBI-ProteinID:
UYD29400
LinkDB
All DBs
Position
3979064..3981694
Genome browser
AA seq
876 aa
AA seq
DB search
MSFVPLHIHSDYSLLDGASQLPELVDRAIALGMKAIALTDHGVMYGAVELIKICRSKNIK
PILGNEMYIINGDIEKQERRPRYHQVVLAKNTKGYKNLVKLTTISHLKGVQGKGIFSRPC
INKELLKEYHEGLIVTSACLGGEVPQAIMSGRPDAARKVAQWYKDVFGDDYYLEIQDHGS
QEDRIVNVEIIKIAKELGIKFVATNDSHFISCYDVEAHDALLCIQTGKLIIEENRMRYSG
TEYLKSAEEMHLLFRDHLPDDVIAEAVATTEEVADKVEPYQIMGEPQIPTPPIPSGHTAD
TYAEEVAWSGLLERLNRKSRNEVDSTYKERLEYELKMIQQMGFSKYFLVVWDYIKFARDN
NIPVGPGRGSAAGSLVAYAMRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEQRDKV
IEYVTEKYGADKVAQIITFNRLTSKAVLKDVARVLNIPYGEADKMAKLIPVVRGKPTKLK
VMISDDTPEPEFKARYDNDEHVRHWIDMAMRIEGTNKTFGVHAAGVVISADPLDEIVPLQ
RNNDGSVITQYFMEDLESMGLLKMDFLGLRNLTLIQKTLDLIEETKGYRVDPDEITGQER
KAQKILAKGEHSTLPKDVQKAYELLEAGELEGVFQLESSGMKQIVRDLKPSNIEDISSIL
ALYRPGPLDAGLIPKFINRKHGREAIDYESVILEPILNETYGIMVYQEQIMKIAQDMAGY
SLGQADLLRRAMGKKKVSEMQKQQEKFIDGATKNGVKKQVAEKLFEDMLKFAEYCLSYDT
EVLTVEYGLIPIGEIVEKRLECSVYSVDINGNVYTQPIAQWHHRGQQEVFEYALEDGSII
RATKDHKFMTTDGQMLPIDEIFERGLDLLQVPHLPE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgttcctttgcatattcacagtgactatagcttgcttgatggtgccagtcag
ctgccggagttggttgatcgcgcgatcgccctggggatgaaagcgatcgcgcttaccgat
catggtgtgatgtatggcgcggtggaattgatcaaaatctgtcgtagcaagaatattaag
cccattcttggcaacgaaatgtatatcattaatggcgatattgaaaagcaagaacgccgc
ccccgttatcatcaagttgtcttagctaaaaatactaaaggttacaaaaatttagtcaaa
ttaactactatttctcacctcaaaggtgtacaaggaaaaggcattttctctcgcccttgc
atcaacaaagaattattaaaagaatatcatgaaggtttgattgttactagtgcttgtttg
gggggagaagttccccaagcaattatgagtggtagaccagatgcagcccgtaaagttgct
caatggtataaagatgtatttggtgatgactattatttagaaattcaagaccacggttcc
caggaagacagaattgttaatgtagaaattattaaaattgccaaggaattaggtattaaa
tttgttgctactaatgattcgcatttcatttcttgttatgacgtagaagcacacgacgct
ttgctatgtattcaaacagggaagctgataattgaagaaaatcggatgcgttatagcggc
acagaatatctcaaatctgccgaagaaatgcatctcctatttcgcgatcatttaccagat
gatgtgattgcggaagctgtggcgactactgaagaagtagcagataaagttgagccatac
cagattatgggtgagccgcaaattcccactccaccgattccttctggtcatactgctgat
acttatgctgaagaagttgcatggagtggacttttagaaagattaaatcgtaaatcccgc
aacgaagtcgattcaacctacaaagaaaggttggaatacgaactcaaaatgattcaacaa
atgggattttccaaatactttttagttgtttgggattatatcaaatttgcgagagataat
aatattcctgtggggcctggacgtggttcggctgcaggttcattagtcgcctatgccatg
cgaattactaacattgacccggtacatcatgggctactatttgagcgtttcttgaatccc
gaacggaaatccatgcctgatattgatacggatttctgcattgaacaaagagataaagtt
attgaatatgtcacagagaaatatggcgctgataaagttgctcaaattattacctttaac
cgtttaacttccaaagctgtattaaaggatgtagccagggtattaaatattccctacggg
gaagcagataaaatggcaaaattaattcctgtggtgcgggggaaaccaactaagttaaaa
gtgatgatttctgatgacaccccagaaccagaatttaaagccagatacgataatgatgag
cacgttcgccattggattgacatggcgatgcgaattgaaggtactaacaaaacctttggt
gttcacgccgcaggtgtggtaatttctgccgatccccttgatgaaattgtgccgctacaa
agaaataacgacggttctgtaattacccagtatttcatggaagacctggaatcaatgggt
ttgttaaagatggactttttgggtttgcggaacttaactctaattcaaaaaactttagat
ttaattgaagaaactaaaggttatcgtgtcgatccagatgaaattacaggtcaagaaaga
aaagctcaaaaaatattagctaaaggtgagcatagtactctacctaaagatgtacagaaa
gcttatgaattattagaagcaggagaattagaaggagtatttcagttagaatcctccggg
atgaaacagatagtcagagatttaaagccttctaatattgaggatatttcttcgattttg
gcattgtaccgaccaggcccattagatgcgggactgattcctaagtttattaaccgtaaa
cacggacgggaagcaattgattatgaaagtgtgattttagaaccaatattaaatgaaacc
tatggcattatggtctatcaagagcaaattatgaaaattgctcaagatatggctggatat
tccttaggacaagccgacttgctgcggcgcgctatgggtaaaaagaaagtttcggagatg
caaaaacagcaagaaaagtttattgatggtgctactaaaaacggggtgaaaaagcaagta
gctgagaaattatttgaggatatgttgaagttcgccgaatattgcttaagctatgataca
gaagttttgactgtagaatatggcttaattcctattggcgaaattgtcgaaaaacgctta
gaatgtagcgtttatagtgttgatattaacggtaatgtttatactcaaccgatagcgcag
tggcatcatcgtggtcaacaagaagtttttgaatatgctttagaagatggttcgattatt
cgagcaacaaaagaccataaatttatgactactgatggtcaaatgttacccattgatgaa
atttttgaacgaggattagatttgttgcaagttccccatttaccggagtaa
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