Treponema pallidum subsp. pallidum Nichols: TP_0005
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Entry
TP_0005 CDS
T00016
Name
(GenBank) DNA gyrase, subunit A (gyrA)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpa03032
]
TP_0005
03400 DNA repair and recombination proteins [BR:
tpa03400
]
TP_0005
Enzymes [BR:
tpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TP_0005
DNA replication proteins [BR:
tpa03032
]
Prokaryotic type
DNA Topoisomerases
TP_0005
DNA repair and recombination proteins [BR:
tpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TP_0005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AAC64998
UniProt:
O83051
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Position
4391..6832
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AA seq
813 aa
AA seq
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MEEISTPEGGVLVPISIETEVKRAYIDYSMSVIVSRALPDVRDGLKPVHRRILYAMEEKG
LRFSGPTRKCAKIVGDVLGSFHPHGDASVYDALVRLGQDFSLRYPVIHPQGNFGTIGGDP
PAAYRYTEAKMARIAESMVEDIKKETVSFVPNFDDSDVEPTVLPGRFPFLLANGSSGIAV
GMTTNMPPHNLREIAAAISAYIENPNLSIQELCDCINGPDFPTGGIIFGKNGIRQSYETG
RGKIVVRARFTIETDSKGRDTIIFTEVPYQVNTTMLVMRIGELARAKVIEGIANVNDETS
DRTGLRIVVELKKGTPAQVVLNHLFAKTPLQSSFNVINLALVEGRPRMLTLKDLVRYFVE
HRVDVVTRRAHFELRKAQERIHLVRALIRALDAIDKIITLIRHSQNTELAKQRLREQFDF
DNVQAQAIVDMQMKRLTGLEVESLRTELKDLTELISSLEELLTSPQKVLGVVKKETRDIA
DMFGDDRRTDIVSNEIEYLDVEDFIQKEEMVILISHLGYIKRVPVSAYRNQNRGGKGSSS
ANLAAHDFISQIFTASTHDYVMFVTSRGRAYWLKVYGIPESGRANRGSHIKSLLMVATDE
EITAIVSLREFSNKSYVFMATARGVVKKVTTDNFVNAKTRGIIALKLSGGDTLVSAVLVQ
DEDEVMLITRQGKALRMSGREVREMGRNSSGVIGIKLTSEDLVAGVLRVSEQRKVLIMTE
NGYGKRVSFSEFSVHGRGTAGQKIYTQTDRKGAIIGALAVLDTDECMCITGQGKTIRVDV
CAISVLGRGAQGVRVLDIEPSDLVVGLSCVMQG
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattagcaccccagagggtggcgttcttgtgcccatttctatagagacagaa
gtcaagcgtgcttacatagactattctatgtccgtcatagtttctcgtgcgcttccggat
gtccgcgacggtttaaagcctgttcacagacgtattctctacgcgatggaggaaaaaggg
ctacgcttttcaggacctacacggaagtgtgccaagatagtgggggacgttttgggaagc
tttcatcctcatggggatgcgtccgtctatgacgcgctagtgcgtcttgggcaagatttt
tcccttcgttatccagtcattcatcctcaaggaaatttcgggactatcgggggcgaccct
ccggcagcgtatcggtacaccgaagcgaagatggcgcgtattgcagaatctatggtagag
gacataaaaaaggaaacggtttcctttgttcccaattttgacgattctgacgtagagccc
acggttcttcctggaaggtttccttttcttcttgcgaatgggtccagtggtattgcagtt
ggtatgactacaaacatgccaccgcataatttgcgtgagatagccgcagctatctctgcg
tacatcgagaacccaaatctttcgattcaggagttatgcgattgtatcaatggtcctgac
tttcccacgggaggcattatctttggaaagaacgggattaggcagtcttacgaaacaggt
cgagggaaaattgttgtccgtgctcgctttaccatcgagacggattcaaagggtagggat
accattatttttacagaagttccgtatcaagttaatactaccatgcttgttatgcgtatt
ggggaacttgcacgtgcgaaagtgatcgaaggtattgcgaatgtaaacgacgagacttcc
gatcgtacagggctacgcatagtggtagagctcaaaaagggtacccccgcacaggtagta
ctcaatcacctgtttgcaaagactcccctgcagtcctcttttaatgtgattaatcttgct
ttggtagagggaagacctcgaatgctcacgctcaaggacctagtgcgctactttgtagaa
caccgggtcgatgtagtgactcggcgtgcgcattttgaattacgtaaggctcaggagcgc
atacacttggtgcgtgcgctgatacgtgccttggatgccattgataaaatcatcacgctt
atccgtcattcgcagaacacagagcttgcaaaacagcgtttgcgtgaacaatttgacttt
gacaacgtgcaggcgcaggcgatcgtagatatgcagatgaagcgcttgacaggtttggaa
gtcgagagtttgcgtacggaattgaaagatttgacggagctgatttcttctctggaggag
ttacttacttctccccaaaaggtcttgggagttgttaagaaagagacgcgtgatatcgca
gatatgtttggggatgatcggcgtacagatattgtgagcaatgaaatagaatatctggat
gtagaagattttatccagaaagaggaaatggttattcttatttcccatcttggttacatt
aagcgcgttccagtgtctgcgtatagaaatcagaatcggggaggaaagggctcaagttca
gcgaatctggcggctcacgattttattagccagatatttactgcatcaacacatgactac
gtgatgtttgtcacgagccgtgggcgggcctattggctaaaagtatacgggattcctgaa
tctggtcgggcgaatcgtggttcgcatattaagtcgcttctcatggtagcgacggacgag
gagatcacggccatcgtatctttgagagagtttagtaataaaagttatgtttttatggct
actgcgcgaggtgtagttaaaaaggtaactactgataattttgtgaatgcgaagacgcgc
ggtattatagcgcttaagctgagcggaggtgacacgctggtgagcgcagtgttggtgcag
gacgaagatgaagtaatgcttattacgcgtcagggaaaagcattgcgcatgtcggggagg
gaggtgcgcgagatgggtcgcaattccagtggggtgattgggataaaattgacgtccgag
gacctagtggcgggggttttgcgagtaagcgaacaacggaaagtactgataatgacggag
aatggatatggtaagcgggtcagtttttcagaattttctgtacatgggcgagggactgca
ggacagaagatttacacacaaacggatagaaaaggtgctataataggtgctcttgctgtt
ctcgatacagatgagtgtatgtgtattactggtcagggaaaaacgattcgcgtggacgtg
tgtgcaatcagcgtgctggggcgtggtgcgcagggcgtgcgtgtgttggatatcgagcca
tcggatttagtagtaggacttagttgtgtaatgcaggggtaa
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