Treponema pallidum subsp. pallidum Nichols: TP_0162
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Entry
TP_0162 CDS
T00016
Name
(GenBank) Holliday junction DNA helicase (ruvB)
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TP_0162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpa03400
]
TP_0162
Enzymes [BR:
tpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TP_0162
DNA repair and recombination proteins [BR:
tpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TP_0162
RecFOR pathway proteins
TP_0162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
nSTAND3
AAA_16
Mg_chelatase
AAA_22
NTPase_1
AAA_14
AAA_PrkA
TIP49
TsaE
AAA_33
NB-ARC
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AAC65150
UniProt:
P96115
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All DBs
Position
complement(183384..184436)
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AA seq
350 aa
AA seq
DB search
MDHTASLSPVRPEAQPTDDRERALRPRLLKDFLGQEKTKRNLRLFIQAARDRNESLDHLF
LIGPPGLGKTTLAHITACELGVECKVTGAPALDKPKDLAGILTALSERSVFFVDEIHRLK
PAIEEMLYIAMEDYELDWVIGQGPSARTVRIPLPPFTLIGATTRAGMVSSPLISRFGIVE
RFEFYTPEELAAIVQRSARLLDITLDARAALALARCSRGTPRVANRLLRRIRDFAQVAGS
AHISETIVRAGLAHLKIDELGLELHDIQLLRVMIEHFGGGPVGAETLAISLGESPETLED
YYEPYLIQIGLMQRTPRGRMATARAYAHLGLPVPEARTLTPHSPEQGTLL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaccgcgtcactgagtcctgtgcgccctgaagcacaacctacagacgatcgc
gagcgtgcgctcagaccgcgcctcctgaaagactttctaggtcaggagaaaacaaaacgc
aacttacgtcttttcattcaggcagcgcgcgatcgcaacgaaagcttagatcacctgttc
ctcatcggccccccggggctcggcaaaacgacgctcgcgcatatcactgcatgcgagctg
ggcgttgagtgcaaggttacaggcgcaccggcgcttgataaaccaaaagatttagcgggt
atcctcactgcgctgagtgagcgaagcgtcttcttcgtggatgaaatccaccgcctcaaa
ccagccatagaagagatgctgtacattgccatggaggactacgaactggattgggttatc
ggtcagggaccgtccgcgcgcacggtgcgcatcccactccccccgtttaccctcattggt
gcaaccactcgcgcgggtatggtttcaagcccgctgattagccgctttggaatcgtagag
cgcttcgagttctatacccctgaggagcttgctgccattgtgcaacgctcagcgcggctt
ctagatatcacgctcgacgcacgcgcagcgttagcccttgcgcggtgttcgcgaggaaca
ccccgggtggccaaccggcttttgcgccgtatacgcgattttgcccaagttgcggggtct
gcacacatcagcgagacgatagtacgcgcagggcttgcccacctaaagatcgacgaatta
gggctagaactgcacgacatacagctgctgcgcgtcatgattgagcacttcggcggaggg
ccagtgggcgcagaaacgctggcgatctccctcggggaatcaccggaaacacttgaggat
tactacgagccctaccttatccaaattgggctcatgcagcgcaccccccgcgggcgcatg
gccaccgcgcgtgcctatgcgcacctaggtctccctgtccccgaggcacgcacgctcacc
ccgcactccccagaacaaggaacgcttctttag
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