Treponema pallidum subsp. pallidum Nichols: TP_0329
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Entry
TP_0329 CDS
T00016
Name
(GenBank) serine hydroxymethyltransferase (glyA)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa00260
Glycine, serine and threonine metabolism
tpa00460
Cyanoamino acid metabolism
tpa00630
Glyoxylate and dicarboxylate metabolism
tpa00670
One carbon pool by folate
tpa00680
Methane metabolism
tpa01100
Metabolic pathways
tpa01110
Biosynthesis of secondary metabolites
tpa01120
Microbial metabolism in diverse environments
tpa01200
Carbon metabolism
tpa01230
Biosynthesis of amino acids
tpa01240
Biosynthesis of cofactors
tpa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TP_0329
09102 Energy metabolism
00680 Methane metabolism
TP_0329
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TP_0329
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TP_0329
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TP_0329
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TP_0329
Enzymes [BR:
tpa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TP_0329
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Motif
Pfam:
SHMT
Baculo_p26
Motif
Other DBs
NCBI-ProteinID:
AAC65317
UniProt:
O83349
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All DBs
Position
350288..352012
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AA seq
574 aa
AA seq
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MNNSALRAYLSTRAPDQIHSAFVAYLANLDLVAHQFPQIASDIVQELIDQRSYVKLIASE
NYSSLAVQAAMANLLTDKYAEGFPHHRYYGGCQNVDSIESAAAAEACALFGAEHAYVQPH
SGADANLVAFWAILSRQIEMPTLSSLGVTAATHLSEEQWEVLRQKMGNQKLMGLDYFSGG
HLTHGYRQNVSGRMFRVVSYAVDRDTGLLDYAAIEAQAKRERPLILLAGYSAYPRSINFR
IFREIADKVGAVLMADMAHFAGLVAGGVFTGDEDPVRWSHIVTSTTHKTLRGPRGAFILC
KKEFAEAVDKGCPLVLGGPLPHVMAAKAVAFREARNAAFKTYAHAVRDNARALADACIQQ
GMQLQTGGTDNHLLLLDVRPFGLTGRQAERALIDCGVTLNRNSLPFDPNGAWLTSGLRIG
TPAVTSLGMGPEEMKRIARLIARVLGAATPVRTKTGALSKSAAEVPGEVRSSVCSEVREL
LARFTLYPELDEPFLRAHFTRRPAGQNTCRRRDLNPYGVTPTDFESVVSASFTTSARAQP
ITRGTKGTAVHVVFLREAPCLPLREPLFFSHEEF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtgaataattccgcactccgtgcgtacctgagtacgcgtgctcctgaccagatacatagt
gcttttgttgcgtatttggccaatcttgatttagttgcgcaccagtttccgcagattgct
tctgatattgtgcaggagctgatagatcagcggtcgtatgtaaagttaatcgcaagtgag
aattacagctctcttgcggtgcaagcggcgatggctaacttgttgactgataaatacgca
gaagggttcccccatcatcgctactatggcgggtgtcagaatgttgattctattgagtct
gccgccgctgcagaagcatgcgcgctctttggtgctgagcacgcatatgtccagccgcac
tccggtgcagatgcgaatcttgttgcattctgggctatcctttcgcggcaaattgaaatg
ccaaccctttcttctcttggtgtcaccgccgctacgcatctgagtgaggaacagtgggaa
gtactgcgccagaaaatgggtaatcaaaaacttatggggttagattatttttcaggcggt
cacctgacccacgggtaccgccaaaatgtttcaggacgaatgtttcgtgtggtgtcctac
gcggtggaccgagacacaggactgctcgattacgctgcaatcgaggcacaggcaaagcgg
gaaagaccacttattttacttgccggatacagcgcgtatcctcgttccattaatttccgc
atctttcgggaaattgcagacaaagtgggcgcagtactcatggctgatatggctcacttt
gctggactggttgcaggcggtgtttttacgggagacgaggatccagtgcgctggtctcat
atcgtgaccagtaccacacacaaaacgttgcgcgggccacgcggtgcctttattttgtgt
aaaaaagaatttgcagaggcggtggataagggctgtccgcttgtgctcggcggcccgctg
ccacatgtgatggcagcaaaggcggttgcgtttcgtgaagctcgaaatgctgcttttaaa
acctatgcgcacgcagtccgtgataatgcgcgtgcgctggcagatgcctgcatacaacag
gggatgcagctgcagacaggggggacggataaccatctgctattgcttgacgtgcgtccg
tttggactgacaggtcgtcaggcagagcgcgcgctgatagactgcggagtgacgctcaac
cgtaactcgctcccctttgacccaaacggcgcatggctcaccagcggactgcgcatcgga
acccccgcggtaacgagccttggaatggggcctgaggaaatgaaaagaatagcgcgcctg
atcgcgcgcgtgctcggcgctgcaacgcctgtgcggacaaagacaggtgcgctaagcaaa
tcggcggccgaggtgcccggcgaggttagaagctcagtctgctcggaagtgcgggagctg
ctcgcacgcttcacgttgtaccctgaactcgacgaacccttcttgcgcgcacactttacg
cgtcgccctgcgggacaaaacacctgccgacgaagggacttgaacccttacggggttacc
ccaacagattttgagtctgtcgtgtctgccagtttcaccacgtcggcccgcgcgcagcct
atcacacgaggaacaaaaggtacagctgttcatgtagtcttcttgcgtgaggccccgtgt
ctcccattgagggagccgttatttttctcccatgaggagttttag
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