Treponema pallidum subsp. pallidum Nichols: TP_0643
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Entry
TP_0643 CDS
T00016
Name
(GenBank) DNA polymerase III, subunit epsilon (dnaQ)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa03030
DNA replication
tpa03430
Mismatch repair
tpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TP_0643
03430 Mismatch repair
TP_0643
03440 Homologous recombination
TP_0643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpa03032
]
TP_0643
03400 DNA repair and recombination proteins [BR:
tpa03400
]
TP_0643
Enzymes [BR:
tpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TP_0643
DNA replication proteins [BR:
tpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TP_0643
DNA repair and recombination proteins [BR:
tpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TP_0643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AAC65617
UniProt:
O83649
LinkDB
All DBs
Position
704799..705446
Genome browser
AA seq
215 aa
AA seq
DB search
MIYDWVFAVHEHVAFTAFDTETTGLKAEEDRIIEIGAVTFDRKGIIARFSTLIFPDRAIP
PDVSKINHITDDMLVNKPRFCEIVSDFSRFIKGTVLVAHNANFDVEFLNAELSLCKKQPL
SHKVVDTYAMAQAVFPGLGRHQYRLQNLALQFGLTVHAAHRAEDDARVCMELFTTMIAHH
AKQNGHCVNHAQSPTIKKLIQEIQASSTDCSQELF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgattgggtttttgcggtgcatgaacacgttgcattcaccgccttcgacacc
gaaacaactggtttaaaagcagaagaagatcgcattatagaaattggtgcagtaacgttt
gatcgaaagggtattattgcgcgctttagcacgctcatcttccctgatcgggctataccc
cctgacgtgagcaaaatcaaccatattaccgacgatatgctcgtcaataagccgcgcttt
tgtgagatagtttcagacttttctcgattcatcaaagggacagtactcgtcgcacataac
gcaaacttcgatgtcgagtttctcaatgcagaactcagcctgtgcaaaaagcaacccctg
tctcacaaagtagttgatacgtacgcgatggcccaagcggtgttccccgggttaggacgc
catcagtaccgtctgcagaatcttgcacttcagtttggacttacggtacacgcagcacac
agagcagaggatgacgctcgagtatgcatggagctttttacaactatgatcgcacaccac
gccaaacaaaacggacactgtgtaaatcatgcacaaagccccaccataaaaaaattaata
caggagatacaggcatcgagcactgactgttcccaggagctgttttag
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