Treponema pallidum subsp. pallidum Nichols: TP_0709
Help
Entry
TP_0709 CDS
T00016
Name
(GenBank) RNA polymerase sigma-28 factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa02020
Two-component system
tpa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TP_0709
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TP_0709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpa03021
]
TP_0709
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tpa02035
]
TP_0709
Transcription machinery [BR:
tpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TP_0709
Bacterial motility proteins [BR:
tpa02035
]
Flagellar system
Flagellar assembly proteins
Stator
TP_0709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AAC65675
UniProt:
O83707
LinkDB
All DBs
Position
775888..776676
Genome browser
AA seq
262 aa
AA seq
DB search
MGNTAFEQQSEEELWLEYRRTRSAKIREYFVVQYAPLVKYVASKIAVGKPGNVEFDDLVS
YGIFGLFDAIDKYDPEKNIRFNTYAVTRIRGAIFDELRSIDWVPRSVRQQTRQIEEAIAD
LEARLGRXATDTEIACALNIELEEYHQLLLKVSGTSVISLADSKFGGDERDHVSVGDSIE
APASLNPDVIVEREEIKRIIAEAIRELSQREQQVLILYYYEEMTLKEIGKVLKVTESRIS
QIHTSANLKLKAKLTNIKKGIR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccttcgaacagcagtcggaagaggagctttggctcgagtatcggagg
acgcgtagcgcgaaaatacgcgagtactttgttgtgcagtacgctcctctggtcaaatac
gttgcaagcaaaattgccgttgggaaaccggggaacgttgagttcgatgacctcgtaagc
tacggtatctttggtctttttgacgctatcgataaatatgacccagaaaaaaacattcga
tttaatacgtacgcggttacgcgcatccgcggtgctatctttgatgaactgcgctccatc
gactgggttccccggtcggtgcgtcagcaaacacgccagatagaagaagcgattgcagat
ctagaggcacgccttgggcgtgmtgccacagatactgagatcgcgtgcgcgctgaatatt
gagcttgaagagtaccaccagctcctcttgaaggtgtccggcacgagcgtgatttccctt
gccgattcgaagtttggtggagatgagcgagaccacgtctctgtgggagacagcatcgaa
gcgcccgcttctctcaatcccgacgtcattgtcgaacgcgaggaaatcaagcgtatcatc
gcagaggcaattagggaactttctcaacgcgagcagcaggtgctcatactatactactac
gaagaaatgaccttaaaggagattggcaaggtgctcaaagtgaccgagtcgcgtatctct
cagatccacaccagcgcgaatttaaagttaaaggcaaagctcaccaacatcaaaaagggt
atccggtaa
DBGET
integrated database retrieval system
