Treponema pallidum subsp. pallidum Nichols: TP_0805
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Entry
TP_0805 CDS
T00016
Name
(GenBank) exoribonuclease II (rnb)
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpa03016
]
TP_0805
Enzymes [BR:
tpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TP_0805
Transfer RNA biogenesis [BR:
tpa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TP_0805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AAC65772
UniProt:
O83783
LinkDB
All DBs
Position
complement(873482..875761)
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AA seq
759 aa
AA seq
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MMELHVGSPVLYRKRPACVHAIERGKDAKITIETEHGLRRVRVKDVLLLHPGTVSSLVEL
LSASHIARISEESVQDAREFFGTEAPSFFELAELLWGASAAQSWAYWEQSVQSAYFVCNE
PAAAVRIRSQQECASCAVQEEKKEARQALKQAFIQELRRVARSARNMAPTAQEGMHRVHV
SQVNEQFTPFLQEIEAFALGHANRCKILQCALGCEHREQAHEILLHFGFWPVYRNPYPDR
LCPLFLSPAHVSGSDGERAAQQDVHTHRCVTQARTDCTHLAAYAIDGEGTRDPDDAISFD
GTYFWIHVASPAELVLPDSHADACARTRGRSLYLPEGAVRMLSDVVVDTCALARDAVSPA
LSFKILLDEHGDISCVHVLRSMVRVTRLSYAEADSQRDTPALQPLFDFARNNIARRKGRG
AVDICFPDVHMRVDFPVQETGQAGKEMNAGDVPDTQGKVPRVHIEAQQSYESMSMVREFM
LLAGEAAARFAFLHNLAFPYVSQERPQLPVQLPAGLAGEYKKRRAMKARRVSTTAAVHAA
LGLSQYSQVTSPLRRYVDLLAHQQLLACIDHAYAKAPAVGSAQTNETLALKLAQADEAAR
QATQAERVSRRHWTLVYFLMHPHTRYEAIVLEPLQPRAHVWLPAVALEADVALGRQAQFN
ERVMLRVVRVRLATLEVHFSVCEHCHRGVTQAVEGEAEQPSXEEYVFGSVLFPCGYFRRC
VYXSHLAGSSLQGVPGFCVKVQCFGQIECKGXQSSLVCG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgatggaactacatgtggggagtccggtgctctatcgaaagcgccctgcgtgtgtacac
gctatcgagcgagggaaggatgcgaagatcaccattgaaaccgaacacgggttaagacgc
gtgcgcgtgaaagacgttttgctcttgcacccgggcactgtttcttccctggtagaacta
ttgtctgcgtctcacattgcgcgtataagcgaggaatccgtacaggacgcgcgcgagttt
ttcggtaccgaagctccttccttttttgaacttgcagagctcctctggggggcttctgcc
gcgcagtcgtgggcctattgggagcaaagtgtgcaaagtgcgtattttgtttgcaatgag
cctgccgccgcagtgcgcatccgctctcagcaagagtgcgcatcctgcgcagtgcaggaa
gaaaaaaaggaagcgcgtcaggcgttaaagcaggcgttcatccaggagctacggcgcgtc
gcacgaagtgcacgcaatatggcaccaactgcgcaggaaggaatgcatcgtgtgcacgtg
tcgcaggtgaacgagcagtttacgccctttctgcaggaaatcgaagcgttcgcgttgggg
cacgcgaatcgctgtaagattttgcagtgtgccttaggctgcgagcacagggagcaagcg
catgaaatactcttgcacttcgggttctggccggtgtatcgcaatccgtatcctgatcgt
ctgtgtcctctatttttaagtcctgctcatgtgtctggttctgatggagaacgtgcggcg
cagcaagatgtgcacacacataggtgtgtcactcaagcacgcacagattgtacgcatctt
gccgcgtatgccatcgatggggagggtacgcgcgaccctgacgatgcgatcagtttcgat
ggtacgtatttttggatccatgtagcgagccctgcagagctcgttcttcctgattcgcac
gcagatgcatgcgcacgtacacggggtcgttcgctctatttgcctgaaggcgcagtgcgc
atgctcagcgacgtggtggttgatacgtgtgcactcgcgcgcgacgcagtttctcctgca
ctgtcttttaaaattttacttgatgagcacggtgacatcagctgtgtgcacgtgctccgg
agcatggtgcgtgttacgcgcctttcctatgcggaggcggattcccagcgcgataccccc
gcgttgcagcctctttttgactttgcgcgcaacaacattgcacggagaaaagggcgcggc
gcagtggacatttgctttcctgatgtccacatgagggtagattttcctgtgcaagaaaca
gggcaagcgggaaaggaaatgaacgccggggacgtgcccgatacacagggaaaggtgccg
cgtgttcacattgaagcacagcagtcgtacgagtctatgagcatggtgcgtgaattcatg
ctcttagcgggagaagcggcagcacggtttgcctttctacataaccttgcctttccttat
gtgagtcaggaacgtcctcagctgcccgtgcaactaccagcgggattggcgggggagtac
aaaaagcggcgcgcgatgaaagctcgtcgcgtgagcacaaccgccgcggtgcacgcagca
ctcgggctgtctcagtacagtcaggtgaccagtcctttgcgtcgctatgtggatttgctt
gcgcatcaacaattactggcgtgtattgatcacgcgtatgcaaaagctcctgctgtagga
agtgcacagacaaacgagacgcttgcgctcaagcttgcgcaggcagatgaggcagcgcgc
caggccacacaagcagagcgtgtatcgcgtcgtcactggacgctcgtatactttttgatg
cacccacacacgcggtacgaagcgattgtgttggagccactgcaaccgcgtgcrcacgtg
tggttacctgctgttgctcttgaggcggatgtagcattaggtcggcaggcgcagttcaac
gaacgcgtaatgctccgtgtcgtgcgtgtgcgccttgccacgttagaagtacatttttct
gtctgcgagcactgtcaccgcggcgtgacgcaggctgtagaaggtgaggcggagcagccc
tcakaagaggagtatgttttcggatctgtgttattcccctgtggatatttcaggcggtgc
gtgtacrgtagccacttggctggttcctccctgcagggcgtgcccggtttctgcgtcaaa
gtacagtgctttggacaaatcgagtgcaagggtwagcaaagttccctcgtgtgcggttag
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