Treponema pallidum subsp. pallidum Nichols: TP_0830
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Entry
TP_0830 CDS
T00016
Name
(GenBank) pseudouridylate synthase (hisT)
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpa03016
]
TP_0830
Enzymes [BR:
tpa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TP_0830
Transfer RNA biogenesis [BR:
tpa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TP_0830
Prokaryotic type
TP_0830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DAAF9_N
Motif
Other DBs
NCBI-ProteinID:
AAC65796
UniProt:
O83802
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All DBs
Position
896627..897469
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AA seq
280 aa
AA seq
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MNDVRKILLRISYDGTRFCGWQKQVSGSRERAPSVQGELEKVAEKIHHQKIAVIGSGRTD
SGVHAVGQAAHFCTPMRNILAYRFIPAFNSLLPHSIRITDAREVSSQLHARFSAVMRTYR
YHLHCAPVAYAHELPYCWHIARMPDIHLLNQYAATLKGELDCTSFAAAGDKSASKSRYFY
DTHFSFNHRVLTFEISANAFLWKMVRSLTGTLLHCEKKRCSVREFVRILHAKDRRLQGPP
HRRMGYSYGTSVTPNTYSVQNRNTLARELASTGNARWKTY
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtgcgcaaaattctcttgcgtatttcgtacgatggaacacgattttgcgga
tggcaaaaacaggtctcaggctcacgggaacgtgctccctctgtccaaggtgagttggaa
aaagttgctgagaaaattcaccaccaaaagatagcagtcatcggttcagggagaacagac
tctggcgtacacgcagtaggacaggcagcacatttttgtacccccatgagaaatatactc
gcgtatcgctttatccctgcatttaattcgctgctcccgcactccattcgcattacagac
gcacgcgaagtctcctctcaactccacgcacgcttctctgccgtcatgcgcacgtaccgt
taccacctccactgcgcacccgtcgcatacgcgcacgaactgccttactgctggcacatt
gcgagaatgcccgatatacacttgctcaatcaatatgctgcaacactcaagggagaacta
gactgcacaagctttgctgctgcaggagataaaagtgcgagtaaatcgcgttatttttac
gacacacacttttctttcaaccatcgcgtactgaccttcgaaatctctgctaatgccttt
ctctggaaaatggtgcgctctcttacaggaaccctactacactgcgaaaagaagcggtgc
tccgtgcgcgaattcgtccgcattttgcacgcgaaagacaggcgcttgcagggcccaccg
caccgccgcatgggctattcctatggaacatccgttaccccgaacacttactccgtgcag
aataggaacaccctcgcacgtgaactggcatccacaggcaatgcaaggtggaagacgtat
taa
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