Treponema pallidum subsp. pallidum Nichols: TP_0872
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Entry
TP_0872 CDS
T00016
Name
(GenBank) flagellar filament cap protein (fliD)
KO
K02407
flagellar hook-associated protein 2
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TP_0872
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tpa02035
]
TP_0872
Bacterial motility proteins [BR:
tpa02035
]
Flagellar system
Flagellar assembly proteins
Filament
TP_0872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FliD_C
FliD_N
RNase_Y_N
DUF7491
Motif
Other DBs
NCBI-ProteinID:
AAC65836
UniProt:
O83842
LinkDB
All DBs
Position
949442..951610
Genome browser
AA seq
722 aa
AA seq
DB search
MSDVRIPGVGAGKYDNLIQSLMKKERIPRDNAAAKVKVYEVQNNALKDVERYARDLRDAV
KGLYSFNNPFAEKEAHSSNERAFTVDATRDAAEQNHTLRVKDIAQGDAFLSDPLPEDFRV
PSGTYTFCIGEKKICVSWKGGHYRDFIRAVNKQGKDSLTLSEIKTSGASRALLFRSELTG
KSSRLSFEDAALDLALRLRVVQEARSDVFTQDVLSVGPGKHARLDFPHPLRAQAGLTLEF
VASLEGASIANEESRAHTPAQGGAPTSSHGNTASAAHNQDGAAAVRPTEPANGAPVQEET
SSVFFEGVTVKNEASQGDLPTTDGLEKYPAVDDKGDNPRAPGESQGTATHEGSGSSTDNA
DDTRSTGALAGSGKLALESLQGHALPLPPLVLTQNAPQMVSIPLREYGDVRALILDNAQA
RGALTLRAIRVRAEDAPGGYVPVNPASQAQDAAFDFDGVHVTRGTNSITDLIPGVTLSLH
ERTEKTETLSVTPDVNAMKNAIIEFVAKYNRLMAEINIVTSNKSAIIDELAYLTPEEKKK
ETEQLGSLHGDSTLLMLKDRLRRNTSNAYRAGDDGASRTLAHIGISTKAHASSGINTAQL
RGYLEIDEEKLHSSLNAQKDQVRALFGHDSDGDLLVDNGVAFTLTELLNPYLGRSGIFAI
RSNGVDERIKSTEKRVETYDKQLEKKERELRHKYHTMDGALRSLQKQSDAIQNFNQSVRN
RN
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgatgtccgcatccccggagtaggggccggtaagtacgataacctcatccagtcg
cttatgaaaaaggagcgcattcctcgggacaacgctgcggcaaaggtgaaggtttacgag
gttcagaacaacgcgctcaaggacgtggagcggtatgcgcgcgatttgcgtgacgccgtc
aaaggactctattccttcaacaaccctttcgcagagaaggaagctcattctagcaacgag
cgtgcgttcaccgtcgatgctactcgagacgctgccgagcagaatcatacactgcgcgtc
aaagacatcgcacaaggggatgcgtttctctcagaccccctccctgaggattttcgcgtt
cccagcgggacgtatacgttctgtattggagaaaaaaaaatatgcgtgtcgtggaaaggc
gggcactatcgtgattttatacgtgccgtcaacaagcagggcaaagactcactcaccctc
tcagagataaaaacgagcggtgcgagccgtgcgctcctgtttcgctcagaattaacggga
aagagcagtcgtctttcctttgaagacgctgcgctggaccttgcactgcgcctgcgcgtc
gtgcaggaagcacgttctgacgtttttacacaggatgtactcagtgttggacctggaaaa
cacgcgcgtttggattttccccaccctctgcgcgcgcaggcagggcttacgctggagttt
gtcgcgtctctggaaggggcatctattgcaaacgaagagtcgcgtgcgcacacgcccgca
cagggaggcgctcccacgtcttcccacggaaatacggcgtccgctgcacataatcaggac
ggagcagctgctgtgcgccctactgaaccggcaaacggcgctcctgtacaggaagaaacc
agttcagtgttctttgagggggtcacagtaaagaacgaggcttcccagggagatctgcct
accacggacggcttggaaaaatacccagctgtcgacgacaaaggagacaatccgcgcgca
cctggagagtcgcagggcacggccacccacgaaggttcagggtcgtccacagacaacgcg
gatgacacacgctcaactggtgccttggcaggatcgggtaagcttgcacttgagtctctg
cagggccacgcgcttcctttaccaccgctggtgcttacacagaacgcaccgcagatggta
tccattcctttgcgcgagtacggggatgttcgcgcgctcatactggataacgcgcaggcg
cgaggcgcactgacactgcgcgctatccgtgtgcgtgccgaggatgcaccaggtggttat
gtccccgtgaaccctgcctctcaagcacaggatgcagcgtttgatttcgatggggtgcac
gttacgcgcggaactaattctatcaccgaccttatccccggcgttacgctttcgctgcac
gaacgtacagaaaaaaccgaaacgctctctgtcacccccgacgtgaacgccatgaagaac
gctattatagaattcgttgctaagtacaatcgactcatggcagaaattaacattgtcacc
agtaacaagtcagccattatcgacgagcttgcgtatcttacccccgaggagaaaaagaaa
gagacagaacaactcggcagcctccacggggattccacgcttcttatgctgaaagacaga
ctgagacgcaataccagcaatgcgtaccgcgccggcgatgacggtgcatcgcggacactt
gcacacatcggcatttccacaaaagcgcacgcttcgtctggcattaacacggcacagcta
cgcggttatcttgaaattgatgaagaaaaattacattccagtttgaacgcacaaaaggat
caggtgcgtgctctttttgggcacgattcagatggtgacctccttgtggacaatggcgtt
gcattcaccctaacagaactgctcaacccttatttgggacgatcgggtatttttgccata
cggtcaaacggcgttgacgagcgtattaaatcgacagaaaaacgcgtagaaacgtacgac
aagcaactggaaaagaaggaacgggagctgcgacacaagtatcacaccatggatggcgcg
cttcgttctctacaaaagcagtctgacgcaattcagaacttcaaccagtctgttcgcaac
aggaattag
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