Treponema pallidum subsp. pallidum Nichols: TP_1017
Help
Entry
TP_1017 CDS
T00016
Name
(GenBank) alanyl-tRNA synthetase (alaS)
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TP_1017
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpa01007
]
TP_1017
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpa03016
]
TP_1017
Enzymes [BR:
tpa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
TP_1017
Amino acid related enzymes [BR:
tpa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TP_1017
Transfer RNA biogenesis [BR:
tpa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TP_1017
Prokaryotic type
TP_1017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
AAC65968
UniProt:
O83980
LinkDB
All DBs
Position
complement(1107937..1109754)
Genome browser
AA seq
605 aa
AA seq
DB search
MSIPIRADQLRSRYLAFFSQKAHVVISGKSLVPEHDPTVLFTTAGMHPLVPYLMGEPHPA
GTRLVNAQKCLRTGDIDAVGDNSHLTFFEMLGNWSLGDYFKEEAIAFSFEFLTGAPWLGI
SPDRLSVTVFAGDEAVARDEESAAIWERLGIARTHIHFLPRADNWWGPTGETGPCGPDTE
IFFDTGVPPCSVSCRPGCSCGKYVEIWNDVFMQYRKDADGRYRPLERYCVDTGMGIERTV
AVLQGKRSVYDTEIFTPLLERIGQLCGKRYGCQGAHDVSMRIVCDHIRAATFILGDPVPV
RPSNVGAGYVLRRIIRRSVRHGRKLGIDGEFLSSLARVVIGQYAAVYPELEEKATCIAQE
LANEERKFLDALRKGEAEYERMIPKFLQGTEREIPGSVAFRLYDTYGFPLELTEELARES
GLRVDRAGFDTAFQAHQACSRIGAQRVFKGGLADHSAETTAYHTATHLLHQALRVVLGTH
VQQKGSNITAERLRFDFSHPRPMSAQEKVQVEQLVNEQIRADLPVCCEVMSLEDAMNSGA
VALFGEKYESTVKVYSIGTFSREVCGGPHVARTGQLGRFSIQKEQSSAAGVRRIRAILEK
SGEKS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcctattcgcgccgatcagctacgctcgcgttatctcgccttctttagccag
aaggctcatgtggttatctcgggtaagtcccttgtgcccgagcacgatcctaccgtgctt
tttactactgctggcatgcatccgttggttccctatcttatgggtgagccacatccggct
ggtacccgcttggtcaatgcgcaaaagtgtctgcgcaccggtgacatcgatgcggtgggc
gataactcgcatctgacctttttcgagatgttgggtaactggtcgttgggcgattacttc
aaggaggaggcaatcgcgttcagctttgaatttcttactggtgctccatggctcggcata
tcccctgaccggctttcggtgactgtttttgcaggggatgaggctgttgcgcgtgatgag
gaatctgccgctatctgggaacgacttggtatcgcgcgcacccatattcattttttacca
cgtgcggataactggtggggacctacgggggaaacagggccatgtggtccggataccgag
atattctttgatactggagttcctccttgcagtgtgagctgtcgtccgggatgttcttgc
ggcaagtacgtagagatttggaatgacgtgttcatgcagtatcgtaaggacgcagacggc
aggtaccggccgcttgaacgttattgtgtggacaccggtatgggtattgaacgcaccgtc
gcggttttgcagggcaagcggtcagtgtatgatacggagatctttaccccgctcctggag
cggataggtcagttatgtgggaagaggtatgggtgtcagggagcgcacgacgtatccatg
cggattgtatgcgatcatatccgtgcggccacttttatcctcggcgatcctgtccctgta
cgcccatctaacgtgggtgcaggctacgtactgcgcagaatcattcgccgttcagtccgc
cacggaaggaagctcggtatcgatggggagttcctgtcctccctcgcgcgcgtggtgatt
gggcaatacgctgcggtatacccggaactggaagagaaagctacgtgtattgcgcaggag
cttgcaaacgaggaacgtaagttcctcgacgccctcaggaagggtgaggcagagtacgag
aggatgatacccaagtttttacaggggacagagcgagaaatacctgggtcagttgccttt
cggctatacgatacgtatggattcccccttgagctgaccgaggaacttgcgcgtgaatcg
ggtttacgggtggaccgtgcagggtttgacaccgcgtttcaggcgcaccaggcgtgctct
cggatcggtgcacagcgagtatttaagggtgggttggctgatcattcagcggaaacgaca
gcgtaccacacggcgacgcatctgctgcaccaggcattgcgagtggttcttggtacgcac
gtgcagcaaaaaggctcaaatattacggcagaacgcctgcgtttcgacttttctcaccca
agaccgatgagtgcgcaggagaaggtgcaggtggaacagttggtgaatgagcagatccgg
gcagacttgccggtgtgctgtgaagtgatgtcgctcgaagatgcgatgaattctggtgcc
gtggcgttgtttggtgagaaatacgaatcaactgtaaaggtgtactccataggaactttt
tctcgggaagtgtgtggcggtccacatgtagcacgtaccgggcagctcgggcggttttct
attcaaaaggaacagtcgagtgcggcgggggtgcggcgtattcgcgcgattcttgagaaa
agcggggaaaagtcgtaa
DBGET
integrated database retrieval system
