Treponema paraluiscuniculi L2: TPLL2_0102
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Entry
TPLL2_0102 CDS
T09221
Name
(GenBank) UvrD/REP family ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpaa
Treponema paraluiscuniculi L2
Pathway
tpaa03420
Nucleotide excision repair
tpaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPLL2_0102
03430 Mismatch repair
TPLL2_0102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpaa03400
]
TPLL2_0102
Enzymes [BR:
tpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPLL2_0102
DNA repair and recombination proteins [BR:
tpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPLL2_0102
MMR (mismatch excision repair)
Other MMR factors
TPLL2_0102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
DEAD
YgfZ_barrel
ResIII
Motif
Other DBs
NCBI-ProteinID:
WKC71991
LinkDB
All DBs
Position
complement(109846..111819)
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AA seq
657 aa
AA seq
DB search
MLSTLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLECGILQSRILALTFTNKA
AHEMSERIKALTGKPLRNMTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIREA
AKEVHLLPEVLDTNCVSTLFSAIKMQRKNLKELQHKERALWHEYQTALKLFNAVDFDDLI
VLPIQIFSEYPDILASYKDRYRYILVDEFQDTSAQQYRLMKMLATQNICVVGDDDQSIYS
WRGAYHDNFLSFEKDFPYATEITLEQNYRSTGTILAAANGVIAHNIQRKEKALWSGNDSG
KPIEIFNPETERDEAIFIANTILAEQIRASYSFSSFGVLLRTNSFMRIIEDVFLQENIPY
RVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTPRRGIGKKTLHLVSDIANTQQ
CSVFNALNQIINKTHAVDLKESHRTAVENFLQLITQARTHLLSGKNLAYKVRKFVEDIQY
FNYLIQEFQKNEHAARFKFLQIEHLVESIEHWEQSSEHGSLYDYLNRVTLLARDNVQKET
EGAVSLMTIHASKGLEFPVVLIAGVEAGTIPHERSIEEVHSIEEERRLFYVAITRAKEKL
YLTHCRTRKRGGKREERTASPFLDEIPKHLVRAHAPEGKISEEEVTLAFTRIKKLFT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctctctacacttaatcctgagcaacgtcgagccgttaccacacttgagggaccgctt
ctcattatcgccggcgcaggctcagggaaaacgcgcgtaatcacggcgcgcatcgcgtat
atgctcgaatgcggtattctgcaatcgcgcattcttgcactgaccttcactaacaaggcc
gcacacgagatgtctgaacgtattaaagctctcacgggcaaacctttacgcaacatgacc
gtcagtacttttcacgcttttggcgttacgattttgcgagaacatatccatgttctcggc
tggaggaagaactttagcatttatgatgaaaatgataaacgtgctctcattcgcgaagca
gcaaaggaagtacatctcctgccagaagttcttgacacaaactgcgtgagcacgctcttt
tccgctattaaaatgcagcgtaagaacttaaaagagctacagcacaaggaacgtgctctt
tggcacgaatatcagactgcgttgaaattatttaatgcggtagactttgacgatttgatc
gtgctgccaatccagatcttcagtgaatatcctgatatccttgcttcatataaagatcgc
tatcgttacattttagtggacgaattccaagacaccagtgcacagcagtaccgtttaatg
aaaatgctcgctacacaaaatatctgtgtagtaggggacgatgatcaatcaatttattct
tggcgtggagcataccatgacaattttctctcttttgaaaaagacttcccctacgccaca
gaaattaccttagagcaaaattaccgttccaccggaactattttggctgccgcaaacggc
gttatcgcacacaatatacaacgcaaggaaaaggcactgtggtccggtaacgattcagga
aaacctattgaaatcttcaatcccgaaacggaacgtgatgaagcaatctttattgcaaac
acaattctcgcagaacaaatacgcgcatcctattctttcagtagttttggagtcctactc
cgcacgaatagttttatgcgcataattgaagacgtatttttgcaagaaaatattccatac
cgtgtctcaggcggcatgagcttttttcagaggaaagaaataaaggatgtgcttagttat
ctgcgggtaatttctaatcctgacgacgatgtcaacctattacgcatcattaataccccg
aggcgaggaattggaaaaaaaacactgcatctagtctccgacattgctaatacacaacaa
tgttccgtgttcaatgcactgaatcaaattatcaataaaacacatgcagtcgatttaaaa
gaatcacatcgtaccgctgtggaaaattttctccagctcattacccaggcgcgtacccat
ctactttcggggaaaaatcttgcgtacaaggtacgcaaatttgttgaagacattcagtat
tttaattacctcatccaagaattccaaaaaaacgaacatgccgcacgttttaaattcttg
caaatcgaacacttagtcgaatccatcgaacactgggaacagagttcagaacacggaagc
ttgtacgactacctaaaccgcgttacgttgctagcacgcgataacgtccaaaaagaaaca
gagggcgctgtgtcgctcatgacaattcatgcgtcgaaagggctggaatttcccgtagtg
cttatcgccggcgtggaagcgggaaccattccacacgaacgaagtatagaagaggttcac
agcatcgaggaagaacgacgccttttctacgttgcaattacccgcgcaaaagagaagttg
tacctgacacactgccgcacaaggaaacgcggcggaaaaagggaagagcgcaccgcctcc
ccttttctggacgaaattcccaaacacctggtgcgtgcccatgcaccggaaggaaaaata
agcgaggaagaggtcacgctggccttcacacgcatcaaaaaactatttacgtga
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