Treponema paraluiscuniculi L2: TPLL2_0669
Help
Entry
TPLL2_0669 CDS
T09221
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tpaa
Treponema paraluiscuniculi L2
Pathway
tpaa03030
DNA replication
tpaa03430
Mismatch repair
tpaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPLL2_0669 (dnaE)
03430 Mismatch repair
TPLL2_0669 (dnaE)
03440 Homologous recombination
TPLL2_0669 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpaa03032
]
TPLL2_0669 (dnaE)
03400 DNA repair and recombination proteins [BR:
tpaa03400
]
TPLL2_0669 (dnaE)
Enzymes [BR:
tpaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPLL2_0669 (dnaE)
DNA replication proteins [BR:
tpaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPLL2_0669 (dnaE)
DNA repair and recombination proteins [BR:
tpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPLL2_0669 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WKC72528
LinkDB
All DBs
Position
complement(724594..728106)
Genome browser
AA seq
1170 aa
AA seq
DB search
MARMSFVHLHVHSDYSLLDGASSLQRLVRTAKSLGQEALALTDHGNMFGALHFQKVCSAE
GIKAIIGCELYVAPESRFDRSEHTIGRRYYHLIVLAKNETGYRNLMVLSSKAYIEGMYYK
PRVDDELLAQHAEGLICLSSCLAGQLPYLLLQGRKKEAEEHARKYRALFGVDNYFIEVQD
HGLDEEKKVAPLLIDLACRLGIPLVVTNDVHYAEQEDSVAQDILLCIGTKKNRSDPNRLK
FKTDEFYLKSSEKMAQLFPHYPEMVLNTVRIAQRCNVRIPQPGPLLPLYQIPHEFSSKEH
YIRHLVHRGLYDRYAVVSEEIKARADYELDVIVRMDFVGYFLIVWDFITWAKEHDIPVGP
GRGSGASSIVAYALKITDIDPLRYKLLFERFMNPERISMPDFDIDFCFERRQEVIEYVRA
RYGNDNVGQIITFGTLKPKAAIRDVGRVLDIPLSEVLMITKLMPDDPKLTFKKAYESEQL
AQMKQEPRYAELFQIAEKLEDTNRNTSLHAAGIVIGKTALTDYVPLYKDSKTGKISTQFG
MDLIEDCGLVKMDFLGLKTLTLIQRTQNLVRRKGGKYTTFSISDISDQDPTTFSMLAEGK
SAAVFQFESRGMQGILKRAKPSKMEDLIALNALYRPGPMAFIDQYIESKRDPGKIKYPDP
CLEDILSETYGVIVYQEQVMQVAQRIAGFSLGEADILRRAMGKKKLAVMQEKKKEFAERA
EKQGFDKKHAENIFEILIPFAGYGFNKSHATAYSVVAYQTAFLKANFPAEFMAANLSNEI
NSAEKLPLYMAEAEKMGLSIQKPDVNASEPYFSVCEGCIVYGLLGIKGLGEQVAFDVFDE
RIRNGPYTSFVEVLDRVPATSLNKKNAEIMIKAGCFDRFGVTRASLTAHLDDVMKYVARK
KAVISSRQASLFDETDLGECSEYTFPVMEEWSQRERLRIEKELMGYYISGHPLDEYRSVI
GEKATLDLGHIENARSENKYLIVGVLNAIHPYTTKSGKNMAFGSFEDLHGSVDIVVFPVL
WEEHRAQFLPETIMGLVGTVDFSKETPAFLVDSVIDLEQLRFAQVKTILAGSEHKRVSSG
EKTPLQKRGVSQEVHIEVSSHVRAHAQFKSLYEILSAHTGGSGEVFLHMHVDDRTYVVYV
PSCKVSATEAFAQQLKGNESFVQILKECVQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatgtcttttgttcatttgcatgttcactcagattattcactgttggatgga
gcttcttcattgcagcggctagtgcgtactgcaaagtcgctgggacaagaagcgcttgcg
cttaccgaccatgggaatatgtttggtgcgttgcattttcaaaaagtttgttctgctgag
ggtatcaaagcgattatcggatgtgagctctacgtggcacccgaaagtcgctttgatcgc
agtgaacatactatcggtcgcagatactatcacctcatcgtgcttgctaagaatgagacg
ggatatcgaaatctaatggttctatcctccaaagcctatatcgagggtatgtactacaaa
ccacgtgtggatgacgagcttctggcccagcatgcagaagggctcatttgtctttcttct
tgtcttgccggacagcttccttatctgttattgcagggcagaaaaaaggaggcagaagaa
cacgcgcgcaaataccgagcgctcttcggtgtagataattactttattgaggtgcaagat
catggacttgatgaagagaagaaagtagcaccgcttttgattgatcttgcatgtaggctc
ggcattccgttggtggttacaaacgacgtgcattatgcggagcaggaagactctgttgca
caagacattctgctgtgcattggaacgaagaagaatcgctccgatcccaatcggcttaaa
tttaaaacagacgagttctatttaaagtcttctgaaaaaatggctcagctgtttccccac
tatcctgaaatggtgctgaatacggtgcgcattgcacagagatgtaatgtgcggattcct
cagcctggcccgctgcttccgctctaccagattcctcatgagttttccagcaaggaacac
tatattcgccatctggtccatcgaggtttgtatgatcgctatgcagtagtgagcgaagaa
attaaggcgcgtgctgattatgaactagatgttatcgtgaggatggattttgttggctac
tttttgatcgtgtgggattttattacgtgggcaaaggagcatgatattcctgttggtccg
gggcgggggtctggagcaagttctattgttgcatatgcgttaaaaattaccgacatcgat
cctcttagatataagttgctttttgaaagatttatgaatcctgagcgtatttctatgccc
gattttgacatcgacttttgttttgagcgcagacaagaagtgattgagtatgtgcgtgcg
cgatatggaaatgacaatgttgggcaaattattacgttcggaacacttaagccaaaggcg
gcgattcgtgatgtagggcgcgtgttggatattccgctttcggaagttttgatgattaca
aaactgatgcctgatgatccaaaactgacttttaaaaaagcgtatgaatctgaacaatta
gcgcaaatgaagcaggagccgcgctatgctgaattatttcaaatagcagaaaagcttgaa
gacaccaatcgaaacactagtttgcatgcagcaggtatcgttattggtaaaacggcgctc
actgattatgtaccgctctacaaggattctaagacgggaaaaattagtacccagtttggt
atggatttaattgaagactgtggattagtgaagatggactttcttgggctaaaaacactt
acgctcatccaacggacgcagaatctcgtacgacgtaaagggggtaagtacacaacgttt
tcgatatcggatatcagtgatcaggatcctacgactttttctatgttggcggaaggaaaa
tctgctgcagtgtttcagtttgaaagtcgcggtatgcaaggcatcctcaagcgtgcaaag
cccagtaagatggaggatctaatagcgttgaatgcattgtaccgacctgggccgatggca
ttcattgatcaatatattgaatcgaaacgtgatcctgggaaaataaaataccctgatccg
tgtttggaagacatcctttcagaaacatatggggtaatagtataccaagagcaggttatg
caggtggcacagcgcattgcaggtttctcgctgggagaagcagatattctgcgccgtgcg
atgggaaagaaaaagcttgcagtgatgcaggaaaagaaaaaggagtttgctgagcgtgca
gagaaacagggttttgataaaaagcacgctgagaatatttttgaaattcttattcctttt
gcagggtatgggtttaataaaagtcacgccactgcatattcagtggttgcctatcaaact
gcatttctaaaagcaaattttcccgccgagtttatggctgcgaacctttcaaacgaaatt
aattctgcagaaaaattaccactctacatggctgaagcagaaaagatgggtctgtccatt
cagaaaccggatgtcaatgcttctgaaccttattttagtgtttgtgaagggtgcattgtg
tatgggttgttgggtattaaaggtttgggtgagcaggttgcgtttgacgtttttgatgag
cgtattcgcaacggtccttacacctcctttgtagaggtgctggatcgagttcctgcaacc
tcgttaaataaaaaaaatgccgaaataatgattaaggctggatgttttgaccggttcggg
gtaactcgcgcaagtcttacggcgcatctcgacgatgtaatgaaatatgttgcgcgaaaa
aaggcggttataagttctagacaagcaagcctttttgacgaaacggatttaggagaatgt
tctgaatacacctttccggttatggaagaatggtcccagagggagagactccgtatagag
aaggaactgatggggtattatatttctggtcatcctcttgatgaatatcgaagtgtgata
ggagaaaaggcaacattggatttaggacatattgaaaatgctcgttctgaaaataaatac
ctgattgtgggagtgctgaatgctattcacccgtatacaactaagtcaggaaagaatatg
gcttttggctcttttgaggatctccatggctctgtagacatagttgtgtttcctgtgctg
tgggaggagcatcgcgcgcagttcttgccagaaactattatggggttggtgggaactgta
gacttttctaaagaaaccccggcgttcttggtagattctgtcattgacttggaacaatta
cggtttgctcaggttaaaactattctggctggatcggagcataagcgtgtatcgtcagga
gagaaaactccactgcagaaacgtggcgtttcgcaggaagtgcacatcgaggtgagttct
cacgtccgtgcgcatgcacagtttaaatcgttgtatgagattttgagtgcacatacagga
ggctcgggtgaagtgtttcttcacatgcatgtggatgaccgtacgtacgtggtgtacgtt
ccttcgtgtaaggtatctgccactgaggcatttgcgcagcaattaaaaggtaatgagagt
tttgtccaaattctaaaggagtgcgtgcaatga
DBGET
integrated database retrieval system
