Tenacibaculum pacificus: PG913_00075
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Entry
PG913_00075 CDS
T08859
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tpac
Tenacibaculum pacificus
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpac03400
]
PG913_00075
DNA repair and recombination proteins [BR:
tpac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PG913_00075
Archaeal homologous recombinant proteins
PG913_00075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
DUF7726
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WBX73701
LinkDB
All DBs
Position
17131..20784
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILKIVLQNINSLKSETPIVIDFENQQFKDVGLYAITGVTGAGKTTILDAITIALYHNI
PRFKGTKGTLIDVVSHGANDAFSCVTFENNNFIYEGYWGIRLANKAGVILKNPIETVSLK
NLSTEKIIATQKRKYIEEVENVTQLDYNQFLRSVMLAQGEFASFLSAKGPEKGKLLEQIT
GEQIYKKIGEEILNRKSSEEKKLAIIKAKINADDILSKEEKEELSEKSAVLITDIAKNEQ
EIAKITAVINWYINYQKLLDKDVVLEKETEKLSLFIDDYKQELSLLSLDEKASPFKELIQ
NFKRNEKNIFDKKNEAEKIEKELKELIPKIEILKNQVKNETTALENTDKEFKIWLPKFDE
ITKLDAQLRNEIDITFQSSEKLNELKEEITNFETKKNKLKSDLEKLKVNIKIDEKNLTEN
KFLLEVKNHISSWNSDLITLKSYEKTLKENAFFIDGKNEEVKKTKTSLKEKTDFLSKENI
EIEKLEKEILDVNSKLSKNNITDLLANQNILSSSENKWKEFKSLSEEILKNEKEKIEKTT
QKTTFSTELINCKLEIEKFENNISKQEISVKDAEKILNLEKSIANYEADRKKLKKGEPCG
LCGSEEHPFTENLEVIGISESEKILIERKNILRNLEKSKVALKIKETQLNTNIEALQTQL
NSILEVVKTLKLKATSLNIDCDLTNISKIDFELNSISEKIKVLTQNLKVAQELQIEKDSL
SKKIEFKKNEVNTLKTEVATLTEKNKNATAEITSKGKITTELTITCNKLENTLKTNLAQF
KYELPAINQADLFIENIEKSVTQYLKIQQNLEALKSEEKVNNLDLENTKKQVENYTKTQN
EFLQKKSASENNTKLLKEQRNSILPSEITVEKKRENLQLRCKEASRKLEESKKDVQKILE
EKSVKEALKVKNNQDLKVLSEEIENLNVEFNKQLKNSDFESKEAIEKALLSKEDILKFSE
NKEKINKKQVELKTLKEENIKAKESLNNFKNFEISEEDSKLKLADFEQENKDNLTEKGKI
SEAFRKDKEIEDRNKEVYQKIDAQTKICNVWKELFKIIGNSKDAFNVYVQRLTLKHLLDL
ANAHLRKLNKRYSLKMEDLYKPKEELNFNLIDHYQTDQSRLVDTSSGGEKFIISLALALG
LSDLASKNVKIDSLFIDEGFGTLDSNTLETVISTLETLQAQGKMIGIISHVENLKERIPT
QIQITKKSNGVSVLGVV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaaagatagtattacaaaatataaattcattaaaatcagaaactccaatt
gttatcgattttgaaaatcagcaatttaaagacgttggtttatatgctataacaggagtt
acaggagcaggaaaaacgaccattttagatgctattacaattgctttgtatcataatatt
cctcgttttaaaggtacaaaaggaactttaattgatgttgttagtcatggtgcaaatgat
gcttttagttgtgttaccttcgaaaataataattttatttatgaaggatattggggcata
cgattagcaaataaagcaggagttattttaaaaaatcctattgaaacagttagtttaaaa
aacttatcgactgagaaaataatagcaactcaaaaaagaaaatatattgaagaagttgaa
aacgtaacgcaattagattacaatcaatttttacgttctgtaatgttggcacaaggtgaa
tttgcatcttttttatcagcaaaaggtcctgaaaaaggaaaattattagagcaaattaca
ggcgaacaaatctataaaaaaattggcgaagaaattttaaatagaaaatcatccgaagaa
aaaaaattagcaataattaaagcaaaaattaatgctgatgatattttatctaaagaagaa
aaagaagagttatcagaaaaatcagcagttttaataaccgatattgctaaaaatgaacaa
gaaatagcaaaaattacagctgttattaattggtatataaattatcaaaaattacttgat
aaagatgtagttcttgaaaaagaaactgaaaaactttctctttttattgatgattataaa
caagaattaagtttattatctttagatgaaaaagcatctccttttaaagaattgattcaa
aattttaaaagaaatgagaaaaatatttttgataaaaagaatgaagctgaaaaaatagaa
aaggaattaaaagagcttatacctaaaattgaaattttaaaaaatcaagttaaaaacgaa
acaacagctttagaaaatacagataaagaatttaaaatttggttgccgaaatttgatgaa
attacaaaattagatgctcaattaagaaatgaaattgatattacttttcaatcatctgaa
aaattaaatgagttaaaagaagaaattacaaattttgaaactaaaaaaaataagctaaaa
tctgatttagaaaaattaaaagtaaacattaaaattgatgaaaaaaatctaactgaaaat
aaatttttattagaagttaaaaatcatatttctagttggaattcagatttaattacttta
aaatcatatgaaaaaactttaaaagaaaatgctttttttattgatggaaaaaatgaagaa
gtaaaaaaaacaaagacatctttaaaagaaaaaactgattttttatctaaagaaaatatc
gaaattgaaaagcttgaaaaagaaattttagatgtaaactcgaaattatcaaaaaataat
attactgatttattagcaaatcaaaatatactttcatcatcagaaaataaatggaaagaa
tttaaaagtttatccgaagaaattctgaaaaatgagaaagaaaaaattgaaaaaacaact
caaaaaactactttttcaacggaattaatcaattgtaaattagaaattgaaaagtttgaa
aataatatttcaaaacaagaaatatcagttaaagatgccgagaaaattctgaatttagaa
aaaagtattgctaattacgaggccgaccgtaaaaaattaaaaaaaggcgaaccttgtggt
ttatgtggttcagaagaacatccgtttacagaaaatttggaagttattgggatttcagaa
tctgaaaaaatacttatcgaaagaaaaaatattttaagaaatttagaaaaatcaaaagta
gctttaaagataaaagaaacacaattaaatacaaatattgaagctctacaaactcaacta
aattcaattttagaggttgtaaaaaccttaaaattaaaagcaacaagtttaaatattgat
tgtgatttaacaaatatttctaaaattgattttgaattaaattcaatatcagaaaaaata
aaagtacttactcaaaatttaaaagtagcacaagaattacaaattgagaaagatagttta
tctaaaaaaattgaatttaagaaaaacgaagtaaatacacttaaaacagaagttgcaaca
ctcacagaaaaaaataaaaatgcaacagcagaaataacatccaaaggtaaaataacgact
gaattaacgattacttgcaataagttagaaaacactttaaaaactaatttagcccaattt
aagtacgaattaccagctataaatcaggcggatttgtttatcgaaaatattgaaaaatct
gttactcaatacttaaaaattcaacaaaatttagaggctttaaaatccgaagaaaaagta
aataatcttgatttagaaaatactaaaaaacaagtagaaaattatacaaaaacgcaaaat
gagtttcttcaaaaaaaatcagcatctgaaaataatacgaagcttttaaaagaacaacga
aatagtattttaccatctgaaattactgtggaaaaaaagcgtgaaaatttacaattaaga
tgtaaagaagcttcaagaaaattggaagaaagtaaaaaagatgttcaaaaaatattagaa
gaaaaatcggtaaaagaagcgttaaaagttaaaaataatcaagatttaaaagttttatcg
gaagaaatagaaaacttaaatgttgaatttaataagcaacttaaaaatagtgattttgaa
tcgaaagaagcgattgaaaaggctttgttatcgaaagaagatattttaaaatttagcgag
aataaagagaaaatcaacaaaaaacaagttgaattaaaaacactaaaagaagagaatata
aaagcaaaagaatctttaaataactttaagaattttgaaatttcagaggaagatagcaaa
ctaaaattagccgattttgaacaagaaaataaagataatttaactgaaaaaggtaaaata
tcagaggcttttagaaaagacaaagaaatagaagatagaaataaagaagtgtatcaaaaa
atagatgcgcaaactaaaatttgtaacgtttggaaagagttatttaaaattatcgggaac
tcaaaagatgcgtttaatgtgtatgtgcaacgtttaactttaaagcatttattagacctc
gccaatgcgcatttgcgtaaattgaacaagcgttattcgttaaaaatggaagatttatac
aagccaaaagaagagcttaattttaatttaattgaccattatcaaactgaccaatctcgt
ttggtagatacttcgagtggtggcgaaaagtttattattagtttggctttggcgttagga
ttatcggatttggcgagtaaaaatgtgaaaattgattcgctttttattgatgagggtttc
ggaactttagacagcaacacgcttgaaacggtaatatcaaccttagaaactttacaagca
caaggaaaaatgattgggattatatcgcatgttgaaaacctgaaagaacgtattccgaca
caaatacaaattaccaaaaaaagtaatggggtgagtgttttgggggttgtgtaa
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