Tenacibaculum pacificus: PG913_01625
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Entry
PG913_01625 CDS
T08859
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpac
Tenacibaculum pacificus
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpac03016
]
PG913_01625 (truB)
Enzymes [BR:
tpac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PG913_01625 (truB)
Transfer RNA biogenesis [BR:
tpac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PG913_01625 (truB)
Prokaryotic type
PG913_01625 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
WBX73969
LinkDB
All DBs
Position
complement(371315..372010)
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AA seq
231 aa
AA seq
DB search
MKTEEDYKNGQVLLIDKPLEWTSFQVVNKLRWEIRQRFNIKKIKVGHAGTLDPLATGLLI
LCTGKKTKIIDEYQGQIKEYTGTITLGGTTPSYDLETEINETFSTEHITEELINETTKQF
TGVIQQKPPIFSAIKKEGVRLYELARKGETTEIKTREVTIPVFEITKIDGNNLDFRVVCS
KGTYIRSLAYDFGIALNSGAHLSKLRRTKIGDFHVDNALSVDEFIKTLKLE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgaagaagattataaaaacggacaagttttattaattgataaacccttagaa
tggacttcttttcaagtggttaacaaattgcgttgggaaataagacaacgatttaacatc
aaaaaaattaaagttgggcatgctggaactttagatcccttggcaactgggttattgata
ctttgtacaggtaaaaaaaccaaaattattgatgaatatcaaggacaaataaaagaatac
acgggaacaattactttaggaggaacaacgcctagttatgatttggaaaccgaaataaat
gaaactttttctacggaacatattaccgaagaattaattaatgaaacaaccaaacaattt
acaggagtaattcagcaaaaaccacctattttttcagcgataaaaaaagaaggtgtacgt
ttatatgaattagcaagaaaaggagaaactaccgaaataaaaacaagagaagttacgatt
cctgtttttgaaatcacaaaaattgatggtaataatcttgattttagagttgtttgtagt
aaaggaacatacattcgttctttagcttatgattttggaattgctttaaattctggtgct
catttatcaaaattaagaagaactaaaatcggtgattttcatgttgataacgccttaagt
gttgacgaatttataaaaacattaaaattggaataa
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